BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033202
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                247   3e-63
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...   225   1e-56
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...   221   1e-55
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...   220   3e-55
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   219   8e-55

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  247 bits (630), Expect = 3e-63
 Identities = 123/265 (46%), Positives = 161/265 (60%), Gaps = 3/265 (1%)
 Frame = -2

Query: 823  VTDNKCSLTFHSDGFFVKDNATQRILFQGKSDKGLYXXXXXXXXXXXXXXXXXXT---NK 653
            V DN C LTF   GF+VKD +T ++LFQG S+ GLY                       K
Sbjct: 667  VYDNWCYLTFDPFGFYVKDLSTGKMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAK 726

Query: 652  APFSIWHQRLGHPSSQTLHQVLSRNKLVVQHSTSSSSFCNDCQLGKSHKLSFHVSTSTTS 473
            A    WH+RLGHPS  TLH V+ +N L V    ++ S C  CQLGKS++LSF     T+S
Sbjct: 727  ADIHTWHRRLGHPSGGTLHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRLSFSTLPCTSS 786

Query: 472  SPLQLVHIDLWGPSPVCSISGYRYFVTIVDDFTRYCWIKPLVLKSDFYHNFVNFKLYVEK 293
             PLQL+H D+WGPSP  S +GYR+++ IVDDFT+Y W+ PL  KSD +     F L ++ 
Sbjct: 787  RPLQLLHTDVWGPSPTSSCTGYRFYLIIVDDFTKYSWLYPLHFKSDVFSTLKTFILKLQT 846

Query: 292  QISCEIKCVRTDCGGEFTSSKFTSLLANSGIQH*FSCAHTPEQNGVVERKHRHLLDITRT 113
             +  +++ +R+D GGEF +    S     GI H  SC HT EQNG  ERKHRH++++ RT
Sbjct: 847  LLDLQVQSIRSDSGGEFLNKSLQSFFNEQGITHQLSCLHTSEQNGCAERKHRHVVEMGRT 906

Query: 112  LLSQSNLPISFWLEIIQTAAFLINR 38
            LLSQS+LP  FW+E  QT  +LINR
Sbjct: 907  LLSQSDLPTQFWVEAFQTVVYLINR 931


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score =  225 bits (573), Expect = 1e-56
 Identities = 112/259 (43%), Positives = 156/259 (60%)
 Frame = -2

Query: 817  DNKCSLTFHSDGFFVKDNATQRILFQGKSDKGLYXXXXXXXXXXXXXXXXXXTNKAPFSI 638
            D  C++ F SDG  + D AT+++L  G +  GLY                     A   +
Sbjct: 410  DYPCTVEFDSDGVRINDKATKKLLIMGSTCDGLYCLKDDSQFKAFFSTRQ---QSASDEV 466

Query: 637  WHQRLGHPSSQTLHQVLSRNKLVVQHSTSSSSFCNDCQLGKSHKLSFHVSTSTTSSPLQL 458
            WH+RLGHP  Q L Q++  N + +  + +S S C  CQLGKS +L F  S+ T++ PL+ 
Sbjct: 467  WHRRLGHPHPQVLQQLVKTNSISI--NKTSKSLCEACQLGKSTRLPFVSSSFTSNRPLER 524

Query: 457  VHIDLWGPSPVCSISGYRYFVTIVDDFTRYCWIKPLVLKSDFYHNFVNFKLYVEKQISCE 278
            VH DLWGPSP+ S+ G+RY+   +D ++R+ WI PL LKSDFY+ FV F   VE Q++ +
Sbjct: 525  VHCDLWGPSPITSVQGFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFVAFHKLVENQLNHK 584

Query: 277  IKCVRTDCGGEFTSSKFTSLLANSGIQH*FSCAHTPEQNGVVERKHRHLLDITRTLLSQS 98
            I   + D GGEF + KF   L N GIQ   S  HTP+QNG+ ERKHRHL+++  ++L QS
Sbjct: 585  ISVFQCDGGGEFVNHKFLQHLQNHGIQQHISYPHTPQQNGLAERKHRHLVELGLSMLFQS 644

Query: 97   NLPISFWLEIIQTAAFLIN 41
             +P+ FW+E   TA FLIN
Sbjct: 645  KVPLKFWVEAFFTANFLIN 663


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score =  221 bits (564), Expect = 1e-55
 Identities = 106/260 (40%), Positives = 157/260 (60%)
 Frame = -2

Query: 820  TDNKCSLTFHSDGFFVKDNATQRILFQGKSDKGLYXXXXXXXXXXXXXXXXXXTNKAPFS 641
            +D  CS+ F +D   + D AT+++L  G++  GLY                   N A   
Sbjct: 403  SDYPCSVEFDADSVRINDKATKKLLVMGRNRDGLYSLEEPKLQVLYSTRQ----NSASSE 458

Query: 640  IWHQRLGHPSSQTLHQVLSRNKLVVQHSTSSSSFCNDCQLGKSHKLSFHVSTSTTSSPLQ 461
            +WH+RLGH +++ LHQ+ S   +++ +    +  C  C LGKS +L F +ST   S PL+
Sbjct: 459  VWHRRLGHANAEVLHQLASSKSIIIINKVVKT-VCEACHLGKSTRLPFMLSTFNASRPLE 517

Query: 460  LVHIDLWGPSPVCSISGYRYFVTIVDDFTRYCWIKPLVLKSDFYHNFVNFKLYVEKQISC 281
             +H DLWGPSP  S+ G+RY+V  +D ++R+ W  PL LKSDF+  FV F+  VE Q+  
Sbjct: 518  RIHCDLWGPSPTSSVQGFRYYVVFIDHYSRFTWFYPLKLKSDFFSTFVMFQKLVENQLGH 577

Query: 280  EIKCVRTDCGGEFTSSKFTSLLANSGIQH*FSCAHTPEQNGVVERKHRHLLDITRTLLSQ 101
            +IK  + D GGEF SS+F   L + GIQ   SC +TP+QNG+ ERKHRH++++  +++ Q
Sbjct: 578  KIKIFQCDGGGEFISSQFLKHLQDHGIQQNMSCPYTPQQNGMAERKHRHIVELGLSMIFQ 637

Query: 100  SNLPISFWLEIIQTAAFLIN 41
            S LP+ +WLE   TA F+IN
Sbjct: 638  SKLPLKYWLESFFTANFVIN 657


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score =  220 bits (560), Expect = 3e-55
 Identities = 117/260 (45%), Positives = 152/260 (58%), Gaps = 1/260 (0%)
 Frame = -2

Query: 817  DNKCSLTFHSDGFFVKDNATQRILFQGKS-DKGLYXXXXXXXXXXXXXXXXXXTNKAPFS 641
            D  CS TF +DG  VKD AT ++L +G S  +GLY                    KA   
Sbjct: 392  DYPCSFTFDADGVLVKDKATCKVLTKGSSTSEGLYKLENPKFQMFYSTRQV----KATDE 447

Query: 640  IWHQRLGHPSSQTLHQVLSRNKLVVQHSTSSSSFCNDCQLGKSHKLSFHVSTSTTSSPLQ 461
            +WH RLGHP+ Q L   L  NK  +Q + S+S  C  C+LGKS +L F  S    S PL+
Sbjct: 448  VWHMRLGHPNPQVLQ--LLANKKAIQINKSTSKMCESCRLGKSSRLPFIASDFIASRPLE 505

Query: 460  LVHIDLWGPSPVCSISGYRYFVTIVDDFTRYCWIKPLVLKSDFYHNFVNFKLYVEKQISC 281
             VH DLWGP+PV SI G++Y+V  +D+ +R+CW  PL  KSDF   F+ F+ +VE  +  
Sbjct: 506  RVHCDLWGPAPVSSIQGFQYYVIFIDNRSRFCWFYPLKHKSDFCSLFMKFQSFVENLLQT 565

Query: 280  EIKCVRTDCGGEFTSSKFTSLLANSGIQH*FSCAHTPEQNGVVERKHRHLLDITRTLLSQ 101
            +I   ++D GGEFTS++F   L  SGIQH  SC HTP+QNG+ ERKHR L +   TL+ Q
Sbjct: 566  KIGTFQSDGGGEFTSNRFLQHLQESGIQHYISCPHTPQQNGLAERKHRQLTERGLTLMFQ 625

Query: 100  SNLPISFWLEIIQTAAFLIN 41
            S  P  FW+E   TA FL N
Sbjct: 626  SKAPQRFWVEAFFTANFLSN 645


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  219 bits (557), Expect = 8e-55
 Identities = 114/261 (43%), Positives = 153/261 (58%), Gaps = 1/261 (0%)
 Frame = -2

Query: 817  DNKCSLTFHSDGFFVKDNATQRILFQGKSDKGLYXXXXXXXXXXXXXXXXXXTN-KAPFS 641
            DN C     ++GF VK+N T RIL QG  + GLY                     +A   
Sbjct: 399  DNNCYFILTANGFVVKENLTGRILLQGVVENGLYPLAGCKTFHKSLTCLSTTIGVRANAD 458

Query: 640  IWHQRLGHPSSQTLHQVLSRNKLVVQHSTSSSSFCNDCQLGKSHKLSFHVSTSTTSSPLQ 461
             WH RLGHPSS   + +   NKL V+ S++   FC+ CQLGK+ +L F  S+  +S PL 
Sbjct: 459  TWHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESSRQSSVPLA 518

Query: 460  LVHIDLWGPSPVCSISGYRYFVTIVDDFTRYCWIKPLVLKSDFYHNFVNFKLYVEKQISC 281
            L+H D+W  SPV S  G  Y+V  +DD++RY W+ PL  KSD +  FV FK   EK  S 
Sbjct: 519  LIHSDVW-VSPVQSTGGCSYYVLFIDDYSRYSWLYPLHRKSDVFATFVKFKTIAEKLFST 577

Query: 280  EIKCVRTDCGGEFTSSKFTSLLANSGIQH*FSCAHTPEQNGVVERKHRHLLDITRTLLSQ 101
             IK ++TD GGEFTS++F   L   GI H  +C HT +QNG+VERKHRH+ ++  TLL+Q
Sbjct: 578  SIKQIQTDNGGEFTSNQFKQFLTAQGIFHRLTCPHTSQQNGIVERKHRHIQEMGLTLLAQ 637

Query: 100  SNLPISFWLEIIQTAAFLINR 38
            S+L   +W++   T+ FLINR
Sbjct: 638  SSLSPQYWVDAFLTSVFLINR 658