BLASTX nr result

ID: Coptis21_contig00033199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033199
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322912.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002314299.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002276209.1| PREDICTED: transcription factor RAX1-like [V...    87   1e-15
emb|CBI17158.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002331475.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>ref|XP_002322912.1| predicted protein [Populus trichocarpa] gi|222867542|gb|EEF04673.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 16/170 (9%)
 Frame = -1

Query: 466 KNYWNTKLKKKFMGIIPPSQMK---------------TLPPNFQSSFQTASTYQNSINFY 332
           KNYWNTKLKKK MG I P  ++               +LP +  +    + ++  S N Y
Sbjct: 106 KNYWNTKLKKKLMGSINPDALRKPQQAAHFSSLLHATSLPSSPSTPLSPSPSFTCSNNSY 165

Query: 331 SLSKSPQGLEALSIPSNFLNNSDKYTSRSTLTSLHESQENLVGLMHNYGENENLLMFGGE 152
           + + +    E +S  S+ L+N+       T  S+ + QE  VG M NY   +NL+MFGGE
Sbjct: 166 NYTLARSFTEPISFSSSPLSNNS-----FTTASMLQPQETFVGSMQNYQVKDNLIMFGGE 220

Query: 151 PSCSSSDGSC-NQMTYNKDIEYEYNXXXXXXXXXXXSESYFFNGISENQK 5
            SCSSSDGSC NQM++ K+ EYE+             ++Y  N + ++QK
Sbjct: 221 ASCSSSDGSCSNQMSHVKE-EYEHGDGANNNTGQVGLQNYLHNRVEDDQK 269


>ref|XP_002314299.1| predicted protein [Populus trichocarpa] gi|222850707|gb|EEE88254.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 60/138 (43%), Positives = 81/138 (58%), Gaps = 16/138 (11%)
 Frame = -1

Query: 466 KNYWNTKLKKKFMGIIPPSQMKTLPPNFQSSFQT---------ASTYQN---SINFYSLS 323
           KNYWNTKLKKK M + P SQ KT  P F SS QT          S Y++   S ++YS +
Sbjct: 106 KNYWNTKLKKKLMAMAPQSQRKT--PPFPSSDQTDPPLPSHSLLSIYKDSGGSFSYYSQN 163

Query: 322 KSPQGLEALS-IPSNFLNNSDKYTSRSTLTSLHESQENLVGLMHNY--GENENLLMFGGE 152
           KS  G + +S IPS+ L+N++   + ++L     SQE L   M  Y     +N L+FG E
Sbjct: 164 KSFTGFDPISQIPSSLLSNNNVSFATNSLLFQPTSQEGLFSPMQYYHPAVKDNFLVFGSE 223

Query: 151 PSCSS-SDGSCNQMTYNK 101
            SCSS SDGSC+Q++Y +
Sbjct: 224 ASCSSNSDGSCSQISYGR 241


>ref|XP_002276209.1| PREDICTED: transcription factor RAX1-like [Vitis vinifera]
          Length = 317

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 62/154 (40%), Positives = 77/154 (50%)
 Frame = -1

Query: 466 KNYWNTKLKKKFMGIIPPSQMKTLPPNFQSSFQTASTYQNSINFYSLSKSPQGLEALSIP 287
           KNYWNTKLKKK MG+   SQ K LPP F S     S   +S  +   S  P     +  P
Sbjct: 106 KNYWNTKLKKKVMGMFSSSQRK-LPP-FPSVQNPPSPSISSSYYIPPSTFPGHELPIPFP 163

Query: 286 SNFLNNSDKYTSRSTLTSLHESQENLVGLMHNYGENENLLMFGGEPSCSSSDGSCNQMTY 107
           S  LNN+   TS  T  SL ++QE   G    Y   +NL MF  E SCSSSDGS +Q+++
Sbjct: 164 STHLNNN---TSPLTNVSLLQTQETFAGPGQYYPVKDNLFMFASEASCSSSDGSGSQISF 220

Query: 106 NKDIEYEYNXXXXXXXXXXXSESYFFNGISENQK 5
            +DI+ E              +SY   G  EN K
Sbjct: 221 GRDIKQE---------EMGNFQSYIPTGFEENHK 245


>emb|CBI17158.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 62/154 (40%), Positives = 77/154 (50%)
 Frame = -1

Query: 466 KNYWNTKLKKKFMGIIPPSQMKTLPPNFQSSFQTASTYQNSINFYSLSKSPQGLEALSIP 287
           KNYWNTKLKKK MG+   SQ K LPP F S     S   +S  +   S  P     +  P
Sbjct: 106 KNYWNTKLKKKVMGMFSSSQRK-LPP-FPSVQNPPSPSISSSYYIPPSTFPGHELPIPFP 163

Query: 286 SNFLNNSDKYTSRSTLTSLHESQENLVGLMHNYGENENLLMFGGEPSCSSSDGSCNQMTY 107
           S  LNN+   TS  T  SL ++QE   G    Y   +NL MF  E SCSSSDGS +Q+++
Sbjct: 164 STHLNNN---TSPLTNVSLLQTQETFAGPGQYYPVKDNLFMFASEASCSSSDGSGSQISF 220

Query: 106 NKDIEYEYNXXXXXXXXXXXSESYFFNGISENQK 5
            +DI+ E              +SY   G  EN K
Sbjct: 221 GRDIKQE---------EMGNFQSYIPTGFEENHK 245


>ref|XP_002331475.1| predicted protein [Populus trichocarpa] gi|222873553|gb|EEF10684.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 61/141 (43%), Positives = 82/141 (58%), Gaps = 14/141 (9%)
 Frame = -1

Query: 466 KNYWNTKLKKKFMGIIPPSQMKTLPPNFQSSFQT-------ASTYQN---SINFYSLSKS 317
           KNYWNTKLKKK M + P SQ K  PP FQS  QT        S Y++   S ++YS ++S
Sbjct: 106 KNYWNTKLKKKLMAMAPQSQRK--PPTFQSPHQTPPLSHSLPSMYKDSGGSFSYYSQNRS 163

Query: 316 PQGLEALS-IPSNFLN-NSDKYTSRSTLTSLHESQENLVGLMHNYGE-NENLLMFGGEPS 146
             G E +S IPS+ L+ NS    + S L     +QE L   M  Y    +N ++FG E S
Sbjct: 164 FTGFEPISQIPSSLLSTNSVSLATNSLL--FQTTQEGLFSPMQYYHPVKDNYMVFGSEAS 221

Query: 145 CSS-SDGSCNQMTYNKDIEYE 86
           CSS SDGSC+ ++Y ++I+ E
Sbjct: 222 CSSNSDGSCSLISYGREIKQE 242


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