BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033196
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531205.1| conserved hypothetical protein [Ricinus comm...    65   4e-09
ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002891584.1| PHD finger family protein [Arabidopsis lyrat...    55   8e-06

>ref|XP_002531205.1| conserved hypothetical protein [Ricinus communis]
           gi|223529207|gb|EEF31182.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 892

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
 Frame = -2

Query: 280 CEKGNHISCLQ-LHKQGV---GDWSCSQCSVARNGKCLPPKNGSDRKNVTARSQTPLNAS 113
           CEKG H+ CL+ ++++G+   G+W C +C+   NGK LPPK G        RS TP    
Sbjct: 427 CEKGFHLKCLEAVNQKGIPRGGEWHCLRCTALSNGKPLPPKYGR-----VMRSITPPKGP 481

Query: 112 SNAAGGQGSME-KLGNSGQKVNNQKTTASLEPRSLHPA 2
           SN+ G Q S+E K     +KVN +K TA+      +PA
Sbjct: 482 SNSGGAQPSLEKKFETLDEKVNQEKLTANGSSGLRNPA 519


>ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|222846100|gb|EEE83647.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
 Frame = -2

Query: 280 CEKGNHISCLQ-LHKQGV--GDWSCSQCSVARNGKCLPPKNGSDRKNVTARSQTPLNASS 110
           CE G HI C + ++++G+  G+W C  C    NGK LPPK G        RS TP    S
Sbjct: 416 CESGFHIKCREAINQKGIPRGEWHCRNCMALSNGKPLPPKYGR-----VMRSATPPKGPS 470

Query: 109 NAAGGQGSMEKLG-NSGQKVNNQKTTASLE 23
           N AG   S+EK   N   KV+ QK+T  ++
Sbjct: 471 NPAGSHSSLEKKAENVDLKVDQQKSTNGVQ 500


>ref|XP_002891584.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337426|gb|EFH67843.1| PHD finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 611

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
 Frame = -2

Query: 280 CEKGNHISCLQLHK-QGV--GDWSCSQCSVARNGKCLPPKNGSDRKNVTARSQTPLNASS 110
           CEKG H+ CLQ H  +GV   +W CS+C    NGK  PPK G        RS T    SS
Sbjct: 336 CEKGYHLKCLQAHNIKGVPKSEWHCSRCVQLYNGKSFPPKYGR-----VMRSATTAKMSS 390

Query: 109 NAAGGQGSMEK-LGNSGQKVNNQ 44
           + A  Q   EK +G   QKV+ +
Sbjct: 391 STAEVQLPTEKRVGKMDQKVSQE 413