BLASTX nr result

ID: Coptis21_contig00033185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033185
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34509.3| unnamed protein product [Vitis vinifera]              207   7e-52
ref|XP_002299456.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
ref|XP_002518849.1| 3-oxoacyl-[acyl-carrier-protein] synthase, p...   197   7e-49
ref|XP_002265207.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   197   9e-49
ref|XP_003530435.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   193   1e-47

>emb|CBI34509.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score =  207 bits (527), Expect = 7e-52
 Identities = 102/153 (66%), Positives = 125/153 (81%), Gaps = 1/153 (0%)
 Frame = -3

Query: 463 LRPLETKQTVSDKSKQTGFLCSSTRRARPVRAINS-TTSAPKREKDPKKRVVITGMGLVS 287
           LRP+E+K+  S   + +G + S  R+ R +RA+ S T SAPKREKDPKKR+VITGMGLVS
Sbjct: 28  LRPVESKKMASAMVRPSGSISSPARKCRTIRAVASPTVSAPKREKDPKKRIVITGMGLVS 87

Query: 286 VFGNDVTTFYDRLLAGESGISLIDRFDASTFSVRFAGQIRDFSSEGYIDGKNDRRLDDCW 107
           VFG+D+ TFYD+LL G SGISLIDRFDAS FSVRF GQIRDFSS+GYIDGKNDRRLDDCW
Sbjct: 88  VFGSDIDTFYDKLLQGVSGISLIDRFDASNFSVRFGGQIRDFSSKGYIDGKNDRRLDDCW 147

Query: 106 RYCMVAGKKALEDASLGPGVLDTVILHLLSTLI 8
           RYC+VAG++AL++ASLG  VL+T+    +  L+
Sbjct: 148 RYCLVAGRRALDNASLGTEVLETMDRSRIGVLV 180


>ref|XP_002299456.1| predicted protein [Populus trichocarpa] gi|222846714|gb|EEE84261.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  203 bits (516), Expect = 1e-50
 Identities = 102/146 (69%), Positives = 122/146 (83%), Gaps = 3/146 (2%)
 Frame = -3

Query: 463 LRPLETKQTVSDKSKQTGFLCSS--TRRARPVRA-INSTTSAPKREKDPKKRVVITGMGL 293
           LRP+E  Q      + +G + +S  T ++R +RA ++ T SAPKREKDPKKRVVITGMGL
Sbjct: 33  LRPVENMQLAPTGRRPSGSISTSGMTSKSRTIRAMVSQTVSAPKREKDPKKRVVITGMGL 92

Query: 292 VSVFGNDVTTFYDRLLAGESGISLIDRFDASTFSVRFAGQIRDFSSEGYIDGKNDRRLDD 113
           VSVFG+ + TFYD+LL GESGISLIDRFDAS+FSVRFAGQIRDFSS+GYIDGKNDRRLDD
Sbjct: 93  VSVFGSGIDTFYDKLLEGESGISLIDRFDASSFSVRFAGQIRDFSSKGYIDGKNDRRLDD 152

Query: 112 CWRYCMVAGKKALEDASLGPGVLDTV 35
           CWRYC+VAGK+ALEDA+LG  VL+ +
Sbjct: 153 CWRYCLVAGKRALEDANLGSEVLENM 178


>ref|XP_002518849.1| 3-oxoacyl-[acyl-carrier-protein] synthase, putative [Ricinus
           communis] gi|223541836|gb|EEF43382.1|
           3-oxoacyl-[acyl-carrier-protein] synthase, putative
           [Ricinus communis]
          Length = 485

 Score =  197 bits (501), Expect = 7e-49
 Identities = 102/153 (66%), Positives = 124/153 (81%), Gaps = 1/153 (0%)
 Frame = -3

Query: 463 LRPLETKQTVSDKSKQTGFLCSSTRRARPVRAINSTT-SAPKREKDPKKRVVITGMGLVS 287
           LRP+E  Q  +  +K TGFL +   ++  ++A+ S   SAPKRE+DPKKRVVITGMGLVS
Sbjct: 27  LRPVENMQMAA--TKPTGFLFTLAPKSGIIKAMASPNISAPKRERDPKKRVVITGMGLVS 84

Query: 286 VFGNDVTTFYDRLLAGESGISLIDRFDASTFSVRFAGQIRDFSSEGYIDGKNDRRLDDCW 107
           VFG+D+ TFY++LL GESGISLIDRFDAS FSVRFAGQIRDFSS+GYIDGKNDRRLDDCW
Sbjct: 85  VFGSDIDTFYNKLLEGESGISLIDRFDASGFSVRFAGQIRDFSSKGYIDGKNDRRLDDCW 144

Query: 106 RYCMVAGKKALEDASLGPGVLDTVILHLLSTLI 8
           RYC+VAGK+AL+DA+LG  VL+ +    +  LI
Sbjct: 145 RYCLVAGKRALDDANLGSQVLEDMDRTKIGVLI 177


>ref|XP_002265207.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I,
           chloroplastic-like [Vitis vinifera]
          Length = 453

 Score =  197 bits (500), Expect = 9e-49
 Identities = 96/139 (69%), Positives = 116/139 (83%), Gaps = 1/139 (0%)
 Frame = -3

Query: 421 KQTGFLCSSTRRARPVRAINS-TTSAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLL 245
           + +G + S  R+ R +RA+ S T SAPKREKDPKKR+VITGMGLVSVFG+D+ TFYD+LL
Sbjct: 7   RPSGSISSPARKCRTIRAVASPTVSAPKREKDPKKRIVITGMGLVSVFGSDIDTFYDKLL 66

Query: 244 AGESGISLIDRFDASTFSVRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCMVAGKKALEDA 65
            G SGISLIDRFDAS FSVRF GQIRDFSS+GYIDGKNDRRLDDCWRYC+VAG++AL++A
Sbjct: 67  QGVSGISLIDRFDASNFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALDNA 126

Query: 64  SLGPGVLDTVILHLLSTLI 8
           SLG  VL+T+    +  L+
Sbjct: 127 SLGTEVLETMDRSRIGVLV 145


>ref|XP_003530435.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I,
           chloroplastic-like [Glycine max]
          Length = 491

 Score =  193 bits (490), Expect = 1e-47
 Identities = 96/123 (78%), Positives = 108/123 (87%), Gaps = 1/123 (0%)
 Frame = -3

Query: 400 SSTRRARPVRAINS-TTSAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGESGIS 224
           SS  R R ++A+ S T  APKREKDPKKRVVITGMGLVSVFG+DV  FY++LL GESGIS
Sbjct: 52  SSAPRCRTIKAMASPTVGAPKREKDPKKRVVITGMGLVSVFGSDVDAFYNKLLEGESGIS 111

Query: 223 LIDRFDASTFSVRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCMVAGKKALEDASLGPGVL 44
           LIDRFDAS FSVRF GQIRDFSSEGYIDGKNDRRLD+CWRYC+VAGK+AL+DA+LG  VL
Sbjct: 112 LIDRFDASNFSVRFGGQIRDFSSEGYIDGKNDRRLDNCWRYCIVAGKRALDDANLGKQVL 171

Query: 43  DTV 35
           DT+
Sbjct: 172 DTM 174


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