BLASTX nr result
ID: Coptis21_contig00033182
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00033182 (301 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002876066.1| hypothetical protein ARALYDRAFT_906453 [Arab... 105 4e-21 ref|NP_190675.4| Lateral root primordium (LRP) protein-like prot... 104 7e-21 gb|ABL63114.1| DNA-binding protein [Catharanthus roseus] 104 7e-21 emb|CAB62628.1| putative protein [Arabidopsis thaliana] gi|11936... 104 7e-21 ref|XP_004173977.1| PREDICTED: uncharacterized protein LOC101224... 103 1e-20 >ref|XP_002876066.1| hypothetical protein ARALYDRAFT_906453 [Arabidopsis lyrata subsp. lyrata] gi|297321904|gb|EFH52325.1| hypothetical protein ARALYDRAFT_906453 [Arabidopsis lyrata subsp. lyrata] Length = 369 Score = 105 bits (262), Expect = 4e-21 Identities = 50/88 (56%), Positives = 56/88 (63%), Gaps = 1/88 (1%) Frame = -1 Query: 262 GGEGGDKGISCQDCGNQAKKDCTHMRCRTCCKSRGFQCQTHVRSTWVPAS-XXXXXXXXX 86 GG GG G+SCQDCGNQAKKDC HMRCRTCCKSRGF+C THVRSTWVPA+ Sbjct: 133 GGGGGSGGVSCQDCGNQAKKDCAHMRCRTCCKSRGFECPTHVRSTWVPAAKRRERQQQLA 192 Query: 85 XXXXXXXXXXVENTTKRPRENLHCATTS 2 E+ KR RENL ++S Sbjct: 193 TVQPQTHLPRGESVPKRHRENLPATSSS 220 >ref|NP_190675.4| Lateral root primordium (LRP) protein-like protein [Arabidopsis thaliana] gi|332645224|gb|AEE78745.1| Lateral root primordium (LRP) protein-like protein [Arabidopsis thaliana] Length = 370 Score = 104 bits (260), Expect = 7e-21 Identities = 50/90 (55%), Positives = 57/90 (63%), Gaps = 1/90 (1%) Frame = -1 Query: 268 SQGGEGGDKGISCQDCGNQAKKDCTHMRCRTCCKSRGFQCQTHVRSTWVPAS-XXXXXXX 92 S G GG G+SCQDCGNQAKKDC+HMRCRTCCKSRGF+C THVRSTWVPA+ Sbjct: 132 SGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQ 191 Query: 91 XXXXXXXXXXXXVENTTKRPRENLHCATTS 2 E+ KR RENL ++S Sbjct: 192 LATVQPQTQLPRGESVPKRHRENLPATSSS 221 >gb|ABL63114.1| DNA-binding protein [Catharanthus roseus] Length = 367 Score = 104 bits (260), Expect = 7e-21 Identities = 44/54 (81%), Positives = 49/54 (90%) Frame = -1 Query: 274 RSSQGGEGGDKGISCQDCGNQAKKDCTHMRCRTCCKSRGFQCQTHVRSTWVPAS 113 RSS G GG G++CQDCGNQAKKDCTH+RCRTCCKSRGFQCQTHV+STWVPA+ Sbjct: 123 RSSVGIGGGGGGMNCQDCGNQAKKDCTHLRCRTCCKSRGFQCQTHVKSTWVPAA 176 >emb|CAB62628.1| putative protein [Arabidopsis thaliana] gi|119360073|gb|ABL66765.1| At3g51060 [Arabidopsis thaliana] gi|225898705|dbj|BAH30483.1| hypothetical protein [Arabidopsis thaliana] Length = 252 Score = 104 bits (260), Expect = 7e-21 Identities = 50/90 (55%), Positives = 57/90 (63%), Gaps = 1/90 (1%) Frame = -1 Query: 268 SQGGEGGDKGISCQDCGNQAKKDCTHMRCRTCCKSRGFQCQTHVRSTWVPAS-XXXXXXX 92 S G GG G+SCQDCGNQAKKDC+HMRCRTCCKSRGF+C THVRSTWVPA+ Sbjct: 132 SGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQ 191 Query: 91 XXXXXXXXXXXXVENTTKRPRENLHCATTS 2 E+ KR RENL ++S Sbjct: 192 LATVQPQTQLPRGESVPKRHRENLPATSSS 221 >ref|XP_004173977.1| PREDICTED: uncharacterized protein LOC101224904, partial [Cucumis sativus] Length = 191 Score = 103 bits (258), Expect = 1e-20 Identities = 41/51 (80%), Positives = 48/51 (94%) Frame = -1 Query: 265 QGGEGGDKGISCQDCGNQAKKDCTHMRCRTCCKSRGFQCQTHVRSTWVPAS 113 +GG GG G++CQDCGNQAKKDC+H+RCRTCCKSRGFQCQTHV+STWVPA+ Sbjct: 89 RGGSGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAA 139