BLASTX nr result

ID: Coptis21_contig00033182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033182
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002876066.1| hypothetical protein ARALYDRAFT_906453 [Arab...   105   4e-21
ref|NP_190675.4| Lateral root primordium (LRP) protein-like prot...   104   7e-21
gb|ABL63114.1| DNA-binding protein [Catharanthus roseus]              104   7e-21
emb|CAB62628.1| putative protein [Arabidopsis thaliana] gi|11936...   104   7e-21
ref|XP_004173977.1| PREDICTED: uncharacterized protein LOC101224...   103   1e-20

>ref|XP_002876066.1| hypothetical protein ARALYDRAFT_906453 [Arabidopsis lyrata subsp.
           lyrata] gi|297321904|gb|EFH52325.1| hypothetical protein
           ARALYDRAFT_906453 [Arabidopsis lyrata subsp. lyrata]
          Length = 369

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/88 (56%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = -1

Query: 262 GGEGGDKGISCQDCGNQAKKDCTHMRCRTCCKSRGFQCQTHVRSTWVPAS-XXXXXXXXX 86
           GG GG  G+SCQDCGNQAKKDC HMRCRTCCKSRGF+C THVRSTWVPA+          
Sbjct: 133 GGGGGSGGVSCQDCGNQAKKDCAHMRCRTCCKSRGFECPTHVRSTWVPAAKRRERQQQLA 192

Query: 85  XXXXXXXXXXVENTTKRPRENLHCATTS 2
                      E+  KR RENL   ++S
Sbjct: 193 TVQPQTHLPRGESVPKRHRENLPATSSS 220


>ref|NP_190675.4| Lateral root primordium (LRP) protein-like protein [Arabidopsis
           thaliana] gi|332645224|gb|AEE78745.1| Lateral root
           primordium (LRP) protein-like protein [Arabidopsis
           thaliana]
          Length = 370

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/90 (55%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = -1

Query: 268 SQGGEGGDKGISCQDCGNQAKKDCTHMRCRTCCKSRGFQCQTHVRSTWVPAS-XXXXXXX 92
           S G  GG  G+SCQDCGNQAKKDC+HMRCRTCCKSRGF+C THVRSTWVPA+        
Sbjct: 132 SGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQ 191

Query: 91  XXXXXXXXXXXXVENTTKRPRENLHCATTS 2
                        E+  KR RENL   ++S
Sbjct: 192 LATVQPQTQLPRGESVPKRHRENLPATSSS 221


>gb|ABL63114.1| DNA-binding protein [Catharanthus roseus]
          Length = 367

 Score =  104 bits (260), Expect = 7e-21
 Identities = 44/54 (81%), Positives = 49/54 (90%)
 Frame = -1

Query: 274 RSSQGGEGGDKGISCQDCGNQAKKDCTHMRCRTCCKSRGFQCQTHVRSTWVPAS 113
           RSS G  GG  G++CQDCGNQAKKDCTH+RCRTCCKSRGFQCQTHV+STWVPA+
Sbjct: 123 RSSVGIGGGGGGMNCQDCGNQAKKDCTHLRCRTCCKSRGFQCQTHVKSTWVPAA 176


>emb|CAB62628.1| putative protein [Arabidopsis thaliana] gi|119360073|gb|ABL66765.1|
           At3g51060 [Arabidopsis thaliana]
           gi|225898705|dbj|BAH30483.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 252

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/90 (55%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = -1

Query: 268 SQGGEGGDKGISCQDCGNQAKKDCTHMRCRTCCKSRGFQCQTHVRSTWVPAS-XXXXXXX 92
           S G  GG  G+SCQDCGNQAKKDC+HMRCRTCCKSRGF+C THVRSTWVPA+        
Sbjct: 132 SGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQ 191

Query: 91  XXXXXXXXXXXXVENTTKRPRENLHCATTS 2
                        E+  KR RENL   ++S
Sbjct: 192 LATVQPQTQLPRGESVPKRHRENLPATSSS 221


>ref|XP_004173977.1| PREDICTED: uncharacterized protein LOC101224904, partial [Cucumis
           sativus]
          Length = 191

 Score =  103 bits (258), Expect = 1e-20
 Identities = 41/51 (80%), Positives = 48/51 (94%)
 Frame = -1

Query: 265 QGGEGGDKGISCQDCGNQAKKDCTHMRCRTCCKSRGFQCQTHVRSTWVPAS 113
           +GG GG  G++CQDCGNQAKKDC+H+RCRTCCKSRGFQCQTHV+STWVPA+
Sbjct: 89  RGGSGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAA 139


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