BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033172
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [S...    61   8e-08
gb|AEP33757.1| organelle transcript processing 82, partial [Aeth...    60   2e-07
ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containi...    59   3e-07
ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi...    59   4e-07
ref|XP_002864446.1| pentatricopeptide repeat-containing protein ...    59   4e-07

>ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
           gi|241927367|gb|EES00512.1| hypothetical protein
           SORBIDRAFT_03g010050 [Sorghum bicolor]
          Length = 506

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/49 (55%), Positives = 36/49 (73%)
 Frame = +3

Query: 15  KLEPDNPGNLVLLSNMLAQGKRWDDASMVRDTMKQCGLKKVPGQSSLNV 161
           +LEP N GN +LLSN+ A+ +RWDD S +R  MK+ GL+ VPG SS+ V
Sbjct: 408 ELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNVPGASSIEV 456


>gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/51 (52%), Positives = 35/51 (68%)
 Frame = +3

Query: 15  KLEPDNPGNLVLLSNMLAQGKRWDDASMVRDTMKQCGLKKVPGQSSLNVSN 167
           K+EP NPG+ VLLSN+ A   RWDD + VR  +   GLKKVPG SS+ + +
Sbjct: 510 KIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDS 560


>ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Brachypodium distachyon]
          Length = 500

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/49 (55%), Positives = 35/49 (71%)
 Frame = +3

Query: 15  KLEPDNPGNLVLLSNMLAQGKRWDDASMVRDTMKQCGLKKVPGQSSLNV 161
           +LEP N GN +LLSN+ A+ +RWDD S +R  MK  GL+ VPG SS+ V
Sbjct: 399 ELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMKDRGLRNVPGASSIEV 447


>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
            [Vitis vinifera]
          Length = 993

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/90 (40%), Positives = 46/90 (51%)
 Frame = +3

Query: 15   KLEPDNPGNLVLLSNMLAQGKRWDDASMVRDTMKQCGLKKVPGQSSLNVSN*FTNFQLMP 194
            +++P+NPGN VL+SN+ A  +RW D   VR  MK  GLKK PG S + V N    F    
Sbjct: 817  EMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMA-- 874

Query: 195  PWNNYSSVSQNPSLPPYEKLSCCLQRLPKE 284
                    S   S   Y KLS   ++L KE
Sbjct: 875  -----RDKSHPQSYEIYSKLSQITEKLAKE 899


>ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310281|gb|EFH40705.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 531

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/87 (37%), Positives = 49/87 (56%)
 Frame = +3

Query: 15  KLEPDNPGNLVLLSNMLAQGKRWDDASMVRDTMKQCGLKKVPGQSSLNVSN*FTNFQLMP 194
           KLEP+N GN +LL+N+ +   RWD++ M+R  MK  G+KK+ G+SS+ V N         
Sbjct: 447 KLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGVKKLAGESSIEVEN--------- 497

Query: 195 PWNNYSSVSQNPSLPPYEKLSCCLQRL 275
               Y  +S + S P  EK+   LQ +
Sbjct: 498 --RVYKFISGDLSHPQVEKIHELLQEM 522