BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033140
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|2...   299   5e-79
ref|NP_174294.1| Intron maturase, type II-like protein [Arabidop...   295   6e-78
ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   295   8e-78
ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...   293   4e-77
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...   291   8e-77

>ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|222848302|gb|EEE85849.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score =  299 bits (765), Expect = 5e-79
 Identities = 140/160 (87%), Positives = 151/160 (94%)
 Frame = +2

Query: 2   SHTNSQMNKFLETMADWYKYADNRRKVVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIAT 181
           +HTN+QMNKFLETMADWY+YADNR+KVVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIA 
Sbjct: 464 AHTNAQMNKFLETMADWYRYADNRKKVVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIAL 523

Query: 182 RDLSSPLREYSNTSAPEYSDLLRMGLIDAIEGVQFSRMSLIPPCDYTPFPRDWIPDHERV 361
           RDLS PLRE SN SAPEYSDLLRMGL+DAIEGVQFS MSLIP CDYTPFPR+WIPDHE+V
Sbjct: 524 RDLSRPLRENSNNSAPEYSDLLRMGLVDAIEGVQFSHMSLIPTCDYTPFPRNWIPDHEQV 583

Query: 362 LHEYIKLQDPRFFCELHRSVKREGLVFPQDEISNIVWDYK 481
           LHEYI+LQDP+FFCELHRS+KR+GL  PQDEIS IVWDYK
Sbjct: 584 LHEYIRLQDPKFFCELHRSIKRQGLSLPQDEISEIVWDYK 623


>ref|NP_174294.1| Intron maturase, type II-like protein [Arabidopsis thaliana]
            gi|12324175|gb|AAG52062.1|AC022455_16 unknown protein;
            35070-37205 [Arabidopsis thaliana]
            gi|332193046|gb|AEE31167.1| Intron maturase, type II-like
            protein [Arabidopsis thaliana]
          Length = 711

 Score =  295 bits (756), Expect = 6e-78
 Identities = 139/171 (81%), Positives = 151/171 (88%)
 Frame = +2

Query: 2    SHTNSQMNKFLETMADWYKYADNRRKVVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIAT 181
            SH+NSQMNKFLETMADWYKYADNR+K VGFCAYVIRSSLAKLYAARYRLKSRAKVY IA+
Sbjct: 526  SHSNSQMNKFLETMADWYKYADNRKKAVGFCAYVIRSSLAKLYAARYRLKSRAKVYSIAS 585

Query: 182  RDLSSPLREYSNTSAPEYSDLLRMGLIDAIEGVQFSRMSLIPPCDYTPFPRDWIPDHERV 361
            RDLS PL E SN SAPEYSDLLRMGL+DAIEGVQFSRMSLIP CDYTPFPR+WIP+HE+V
Sbjct: 586  RDLSHPLSESSNNSAPEYSDLLRMGLVDAIEGVQFSRMSLIPSCDYTPFPRNWIPNHEQV 645

Query: 362  LHEYIKLQDPRFFCELHRSVKREGLVFPQDEISNIVWDYKICGIWSRRTRN 514
            L EYI+LQDP+FFC LHRS+KREGL  PQDEIS  VWD+K  G W  +  N
Sbjct: 646  LQEYIRLQDPKFFCGLHRSIKREGLTLPQDEISEAVWDFKTLGAWRSKYEN 696


>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
            vinifera]
          Length = 689

 Score =  295 bits (755), Expect = 8e-78
 Identities = 140/183 (76%), Positives = 160/183 (87%), Gaps = 6/183 (3%)
 Frame = +2

Query: 2    SHTNSQMNKFLETMADWYKYADNRRKVVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIAT 181
            +HTNSQMNKFLETMADWY+YADNR+K+VGFCAYVIRSSLAKLYAARYRLKSRAKVY IA+
Sbjct: 504  AHTNSQMNKFLETMADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYNIAS 563

Query: 182  RDLSSPLREYSNTSAPEYSDLLRMGLIDAIEGVQFSRMSLIPPCDYTPFPRDWIPDHERV 361
            RDLS PLRE SN SAPEYSDLLRMGL+DAIEGVQFS MS IP CDY PFPR+WIPDHE+V
Sbjct: 564  RDLSRPLRESSNNSAPEYSDLLRMGLVDAIEGVQFSHMSSIPSCDYAPFPRNWIPDHEQV 623

Query: 362  LHEYIKLQDPRFFCELHRSVKREGLVFPQDEISNIVWDYKICGIWSRRT------RNDDI 523
            L EYIKL +P+FFC+L RS+K+EGL  PQDEIS+IVWDYK  G+WS+R+      +ND  
Sbjct: 624  LREYIKLDNPKFFCDLLRSIKQEGLSLPQDEISDIVWDYKTLGVWSKRSDGEKELKNDSG 683

Query: 524  KQI 532
            K++
Sbjct: 684  KEM 686


>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Glycine
            max]
          Length = 686

 Score =  293 bits (749), Expect = 4e-77
 Identities = 141/182 (77%), Positives = 159/182 (87%), Gaps = 5/182 (2%)
 Frame = +2

Query: 2    SHTNSQMNKFLETMADWYKYADNRRKVVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIAT 181
            +HTNSQMNKFLETMADWY+YADNR+K+VGFCAYV+RSSLAKLYAARYRLKSRAKVY IA+
Sbjct: 503  AHTNSQMNKFLETMADWYRYADNRKKIVGFCAYVVRSSLAKLYAARYRLKSRAKVYGIAS 562

Query: 182  RDLSSPLREYSNTSAPEYSDLLRMGLIDAIEGVQFSRMSLIPPCDYTPFPRDWIPDHERV 361
            R+LS PLRE SN SAPEYSDLLRMGL+DAIEGVQFS MSLIP CDYTPFPR+WIPDHERV
Sbjct: 563  RNLSRPLRESSNNSAPEYSDLLRMGLVDAIEGVQFSHMSLIPSCDYTPFPRNWIPDHERV 622

Query: 362  LHEYIKLQDPRFFCELHRSVKREGLVFPQDEISNIVWDYKICGIWSRRTRND-----DIK 526
            LHEYIKL++P+FFCEL RSVKR+GL  PQDEIS +VWDYK  G+   +   D     D+K
Sbjct: 623  LHEYIKLENPKFFCELLRSVKRKGLSLPQDEISQMVWDYKTLGVRYFQCNKDKEIKSDLK 682

Query: 527  QI 532
            +I
Sbjct: 683  EI 684


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
            gi|223541113|gb|EEF42669.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 681

 Score =  291 bits (746), Expect = 8e-77
 Identities = 137/177 (77%), Positives = 159/177 (89%)
 Frame = +2

Query: 2    SHTNSQMNKFLETMADWYKYADNRRKVVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIAT 181
            +H+N+QMNKFLETMA+WY+YADNR+KVVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIA+
Sbjct: 496  AHSNAQMNKFLETMAEWYRYADNRKKVVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIAS 555

Query: 182  RDLSSPLREYSNTSAPEYSDLLRMGLIDAIEGVQFSRMSLIPPCDYTPFPRDWIPDHERV 361
            R+LS PLRE SN+SAPEYSDLLRMGL+DAIEGVQFS MS IP CDYTPFPR W+PDHE+V
Sbjct: 556  RNLSRPLRESSNSSAPEYSDLLRMGLVDAIEGVQFSHMSSIPSCDYTPFPRIWVPDHEQV 615

Query: 362  LHEYIKLQDPRFFCELHRSVKREGLVFPQDEISNIVWDYKICGIWSRRTRNDDIKQI 532
            LHEYI+LQDP+FFC+LHRS+K +GL  PQDEIS IVW+YK  GI  RR ++   K++
Sbjct: 616  LHEYIRLQDPKFFCDLHRSIKHQGLTLPQDEISEIVWEYKTLGI--RRNQSSGEKEL 670