BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033128
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
emb|CBI20513.3| unnamed protein product [Vitis vinifera]               91   1e-16
gb|AFK44709.1| unknown [Lotus japonicus]                               88   8e-16
ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Vitis vinifera]
          Length = 848

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
 Frame = -1

Query: 265 DYVSNIFKSSGRLLMEEFAENLILALKASK-AAEDVSYFITNYAISMPNLAVEDVVIKFE 89
           DYV++IFKS GRL +  F E  + A KA    AE++S FI  YA +MPNLAVEDV++KF+
Sbjct: 327 DYVASIFKSLGRLSLASFMEKFVSAFKACDYGAEEISDFIFYYASNMPNLAVEDVILKFK 386

Query: 88  DMHKKLDVIPSSKSYEMLIIYGCDLREVH 2
           D+H +L V PSS SY  L+ Y CD  +VH
Sbjct: 387 DLHAQLVVTPSSTSYNKLVTYCCDSFKVH 415


>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/89 (50%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
 Frame = -1

Query: 265 DYVSNIFKSSGRLLMEEFAENLILALKASK-AAEDVSYFITNYAISMPNLAVEDVVIKFE 89
           D++++IFKS GRL +E FA+  +L LK+    AED+S  I +YA S+PNL VEDVV KF+
Sbjct: 262 DHLASIFKSLGRLSLESFAKKFLLVLKSCDYGAEDISTLIFSYATSIPNLVVEDVVSKFK 321

Query: 88  DMHKKLDVIPSSKSYEMLIIYGCDLREVH 2
            +H  + + PSS SYE L++Y C+L +VH
Sbjct: 322 TLHMIMKMSPSSTSYEKLVVYNCNLLKVH 350


>emb|CBI20513.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 7/95 (7%)
 Frame = -1

Query: 265 DYVSNIFKSSGRLLMEEFAENLILALKASKA-------AEDVSYFITNYAISMPNLAVED 107
           DYV++IFKS GRL +  F E  + A KA          AE++S FI  YA +MPNLAVED
Sbjct: 91  DYVASIFKSLGRLSLASFMEKFVSAFKACGTLMIMYYGAEEISDFIFYYASNMPNLAVED 150

Query: 106 VVIKFEDMHKKLDVIPSSKSYEMLIIYGCDLREVH 2
           V++KF+D+H +L V PSS SY  L+ Y CD  +VH
Sbjct: 151 VILKFKDLHAQLVVTPSSTSYNKLVTYCCDSFKVH 185


>gb|AFK44709.1| unknown [Lotus japonicus]
          Length = 217

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/83 (50%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
 Frame = -1

Query: 259 VSNIFKSSGRLLMEEFAENLILALKASK-AAEDVSYFITNYAISMPNLAVEDVVIKFEDM 83
           V+ IF++ GRLL+E  AE L+L  K S   A++++ FI +YA+S+PNL VEDV+ KF+D+
Sbjct: 127 VAKIFQALGRLLLEPVAEKLLLDFKTSNYEADNITNFIASYAVSIPNLLVEDVITKFKDL 186

Query: 82  HKKLDVIPSSKSYEMLIIYGCDL 14
           H+ L++ PSS SYE LI++ C L
Sbjct: 187 HQMLEISPSSSSYEKLILHSCAL 209


>ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Glycine max]
          Length = 1117

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/86 (48%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
 Frame = -1

Query: 259 VSNIFKSSGRLLMEEFAENLILALKA-SKAAEDVSYFITNYAISMPNLAVEDVVIKFEDM 83
           +++IF+S GRL +E  A++L+L L+A    A+++S FI +YA+S+PNLAVED++ KF++M
Sbjct: 318 IADIFQSLGRLHLESIADDLLLDLRACDHDADNISNFIVSYAVSIPNLAVEDIIPKFKNM 377

Query: 82  HKKLDVIPSSKSYEMLIIYGCDLREV 5
           H+ L+V+PS+ SYE LI++ C L +V
Sbjct: 378 HELLEVLPSTSSYEKLILHCCGLDKV 403