BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033083
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79881.1| hypothetical protein VITISV_017990 [Vitis vinifera]    97   1e-18
ref|XP_003551782.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    96   3e-18
ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    96   4e-18
emb|CBI36559.3| unnamed protein product [Vitis vinifera]               96   4e-18
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    96   4e-18

>emb|CAN79881.1| hypothetical protein VITISV_017990 [Vitis vinifera]
          Length = 305

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/64 (73%), Positives = 52/64 (81%)
 Frame = -3

Query: 250 THACDVDKMNRILREKFIELYDIPILDDLLESFQTSXXXXXXXXXPDRGDFDLEHVLESP 71
           THACDVDKMNRILREKF+ELY +PIL++LLESFQTS         PDRG+FDL  VLESP
Sbjct: 242 THACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESP 301

Query: 70  YFFN 59
           YFFN
Sbjct: 302 YFFN 305


>ref|XP_003551782.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 992

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/64 (70%), Positives = 53/64 (82%)
 Frame = -3

Query: 250  THACDVDKMNRILREKFIELYDIPILDDLLESFQTSXXXXXXXXXPDRGDFDLEHVLESP 71
            THACDVDKMNRILREKF+ELY+ P+L++LLESFQ+S         P+RGDFDL+ VLESP
Sbjct: 929  THACDVDKMNRILREKFVELYETPVLENLLESFQSSFPSLSFPSLPERGDFDLKEVLESP 988

Query: 70   YFFN 59
            YFFN
Sbjct: 989  YFFN 992


>ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 1015

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/64 (70%), Positives = 52/64 (81%)
 Frame = -3

Query: 250  THACDVDKMNRILREKFIELYDIPILDDLLESFQTSXXXXXXXXXPDRGDFDLEHVLESP 71
            THACDVDKMNRILREKF+ELY+ P+L++LLESFQ+S         P+RGDFDL  VLESP
Sbjct: 952  THACDVDKMNRILREKFVELYETPVLENLLESFQSSFPSLSFPSLPERGDFDLREVLESP 1011

Query: 70   YFFN 59
            YFFN
Sbjct: 1012 YFFN 1015


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/64 (71%), Positives = 52/64 (81%)
 Frame = -3

Query: 250 THACDVDKMNRILREKFIELYDIPILDDLLESFQTSXXXXXXXXXPDRGDFDLEHVLESP 71
           THACDVDKMN+ILREKF+ELY +PIL++LLESFQTS         PDRG+FDL  VLESP
Sbjct: 745 THACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESP 804

Query: 70  YFFN 59
           YFFN
Sbjct: 805 YFFN 808


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/64 (71%), Positives = 52/64 (81%)
 Frame = -3

Query: 250  THACDVDKMNRILREKFIELYDIPILDDLLESFQTSXXXXXXXXXPDRGDFDLEHVLESP 71
            THACDVDKMN+ILREKF+ELY +PIL++LLESFQTS         PDRG+FDL  VLESP
Sbjct: 916  THACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESP 975

Query: 70   YFFN 59
            YFFN
Sbjct: 976  YFFN 979