BLASTX nr result

ID: Coptis21_contig00033078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033078
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307734.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
emb|CBI19895.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002279563.1| PREDICTED: receptor protein kinase CLAVATA1-...   105   3e-21
ref|XP_002510557.1| Receptor protein kinase CLAVATA1 precursor, ...   104   9e-21
gb|AAB58929.1| CLV1 receptor kinase [Arabidopsis thaliana]            102   3e-20

>ref|XP_002307734.1| predicted protein [Populus trichocarpa]
           gi|224144099|ref|XP_002336108.1| predicted protein
           [Populus trichocarpa] gi|222857183|gb|EEE94730.1|
           predicted protein [Populus trichocarpa]
           gi|222872880|gb|EEF10011.1| predicted protein [Populus
           trichocarpa]
          Length = 973

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/110 (53%), Positives = 79/110 (71%), Gaps = 4/110 (3%)
 Frame = +3

Query: 3   DLEVLKKLKTSL---GSSELEDW-AFXXXXXXXXXFTGILCDENSRVISLNISFRSFPGS 170
           DLEVL KLKTS+     + L+DW A          F+G+ CDE+SRV+SLN+SFR  PGS
Sbjct: 23  DLEVLLKLKTSMYGHNGTGLQDWVASPASPTAHCYFSGVTCDEDSRVVSLNVSFRHLPGS 82

Query: 171 IPPEVGLLSNLINLTMSSNALSGKLPLELTALTSLKVFNVSNNTLSGEFP 320
           IPPE+GLL+ L+NLT+S N L+G  P+E+  LTSL++ N+SNN ++G FP
Sbjct: 83  IPPEIGLLNKLVNLTLSGNNLTGGFPVEIAMLTSLRILNISNNVIAGNFP 132


>emb|CBI19895.3| unnamed protein product [Vitis vinifera]
          Length = 809

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/110 (49%), Positives = 78/110 (70%), Gaps = 4/110 (3%)
 Frame = +3

Query: 3   DLEVLKKLKTSL---GSSELEDWAFXXXXXXXXX-FTGILCDENSRVISLNISFRSFPGS 170
           DL+VL KL++ +     S LEDW            F+G+ CDE+SRV+SLN+SF +  GS
Sbjct: 26  DLQVLLKLRSFMIGPKGSGLEDWVDDSSSLFPHCSFSGVSCDEDSRVVSLNLSFVTLFGS 85

Query: 171 IPPEVGLLSNLINLTMSSNALSGKLPLELTALTSLKVFNVSNNTLSGEFP 320
           IPPE+G+L+ L+NLT++ + L+GKLP+E+  LTSLK+ N+SNN  +G+FP
Sbjct: 86  IPPEIGMLNKLVNLTLACDNLTGKLPMEMAKLTSLKLVNLSNNNFNGQFP 135


>ref|XP_002279563.1| PREDICTED: receptor protein kinase CLAVATA1-like [Vitis vinifera]
          Length = 984

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/110 (49%), Positives = 78/110 (70%), Gaps = 4/110 (3%)
 Frame = +3

Query: 3   DLEVLKKLKTSL---GSSELEDWAFXXXXXXXXX-FTGILCDENSRVISLNISFRSFPGS 170
           DL+VL KL++ +     S LEDW            F+G+ CDE+SRV+SLN+SF +  GS
Sbjct: 30  DLQVLLKLRSFMIGPKGSGLEDWVDDSSSLFPHCSFSGVSCDEDSRVVSLNLSFVTLFGS 89

Query: 171 IPPEVGLLSNLINLTMSSNALSGKLPLELTALTSLKVFNVSNNTLSGEFP 320
           IPPE+G+L+ L+NLT++ + L+GKLP+E+  LTSLK+ N+SNN  +G+FP
Sbjct: 90  IPPEIGMLNKLVNLTLACDNLTGKLPMEMAKLTSLKLVNLSNNNFNGQFP 139


>ref|XP_002510557.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
           communis] gi|223551258|gb|EEF52744.1| Receptor protein
           kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 985

 Score =  104 bits (259), Expect = 9e-21
 Identities = 54/110 (49%), Positives = 76/110 (69%), Gaps = 4/110 (3%)
 Frame = +3

Query: 3   DLEVLKKLKTSL---GSSELEDWAFXXXXXXXXXFTGILCDENSRVISLNISFR-SFPGS 170
           D E+L KLK+S+     S L+DW           F+G+ CD++SRV+SLN++ R  F G 
Sbjct: 28  DAELLLKLKSSMIARNGSGLQDWEPSPSPSAHCSFSGVTCDKDSRVVSLNLTSRHGFFGF 87

Query: 171 IPPEVGLLSNLINLTMSSNALSGKLPLELTALTSLKVFNVSNNTLSGEFP 320
           IPPE+GLL+ L+NL+++S  L+G+LPLEL  LTSL++FN+SNN   G FP
Sbjct: 88  IPPEIGLLNKLVNLSIASLNLTGRLPLELAQLTSLRIFNISNNAFIGNFP 137


>gb|AAB58929.1| CLV1 receptor kinase [Arabidopsis thaliana]
          Length = 980

 Score =  102 bits (255), Expect = 3e-20
 Identities = 52/110 (47%), Positives = 77/110 (70%), Gaps = 4/110 (3%)
 Frame = +3

Query: 3   DLEVLKKLKTSLGSSE---LEDWAFXXXXXXXXXFTGILCDENSRVISLNISFRSFPGSI 173
           D+EVL  LK+S+   +   L DW           F+G+ CD+++RVISLN+SF    G+I
Sbjct: 27  DMEVLLNLKSSMIGPKGHGLHDWIHSSSPDAHCSFSGVSCDDDARVISLNVSFTPLFGTI 86

Query: 174 PPEVGLLSNLINLTMSSNALSGKLPLELTALTSLKVFNVSNN-TLSGEFP 320
            PE+G+L++L+NLT+++N  +G+LPLE+ +LTSLKV N+SNN  L+G FP
Sbjct: 87  SPEIGMLTHLVNLTLAANNFTGELPLEMKSLTSLKVLNISNNGNLTGTFP 136


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