BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033074
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-41
emb|CBI33923.3| unnamed protein product [Vitis vinifera]              144   1e-41
ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containi...   147   3e-41
ref|XP_002329535.1| predicted protein [Populus trichocarpa] gi|2...   128   9e-37
ref|XP_003561223.1| PREDICTED: pentatricopeptide repeat-containi...   126   1e-34

>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 719

 Score =  144 bits (364), Expect(2) = 1e-41
 Identities = 61/76 (80%), Positives = 68/76 (89%)
 Frame = +2

Query: 104 WNSMIMGYGMHGYGEKALEMFLEMEKSGETPNGATFVCVLSACTHAGLVLEGWWYFDLMK 283
           WNSMIMGYGMHG  +KALEMFL+MEK G  PN ATF+CVLSAC H+G++LEGWWYFDLM+
Sbjct: 422 WNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMR 481

Query: 284 RVYKIEPKVEHYGCMV 331
           R YKIEPKVEHYGCMV
Sbjct: 482 RAYKIEPKVEHYGCMV 497



 Score = 50.1 bits (118), Expect(2) = 1e-41
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +3

Query: 3   DVLLSTSLLTMYAKCGAMDLAREVFSE 83
           DVLLST+LLTMYAKCGAMDLAR+VF +
Sbjct: 387 DVLLSTALLTMYAKCGAMDLARDVFDK 413


>emb|CBI33923.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  144 bits (364), Expect(2) = 1e-41
 Identities = 61/76 (80%), Positives = 68/76 (89%)
 Frame = +2

Query: 104 WNSMIMGYGMHGYGEKALEMFLEMEKSGETPNGATFVCVLSACTHAGLVLEGWWYFDLMK 283
           WNSMIMGYGMHG  +KALEMFL+MEK G  PN ATF+CVLSAC H+G++LEGWWYFDLM+
Sbjct: 273 WNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMR 332

Query: 284 RVYKIEPKVEHYGCMV 331
           R YKIEPKVEHYGCMV
Sbjct: 333 RAYKIEPKVEHYGCMV 348



 Score = 50.1 bits (118), Expect(2) = 1e-41
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +3

Query: 3   DVLLSTSLLTMYAKCGAMDLAREVFSE 83
           DVLLST+LLTMYAKCGAMDLAR+VF +
Sbjct: 238 DVLLSTALLTMYAKCGAMDLARDVFDK 264


>ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 595

 Score =  147 bits (372), Expect(2) = 3e-41
 Identities = 63/76 (82%), Positives = 72/76 (94%)
 Frame = +2

Query: 104 WNSMIMGYGMHGYGEKALEMFLEMEKSGETPNGATFVCVLSACTHAGLVLEGWWYFDLMK 283
           WNSMIMGYG+HG G+KALE+FLEMEK+G+ PN ATF+ VLSACTHAG+V+EGWWYFDLM+
Sbjct: 373 WNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISVLSACTHAGMVMEGWWYFDLMQ 432

Query: 284 RVYKIEPKVEHYGCMV 331
           RVYKIEPKVEHYGCMV
Sbjct: 433 RVYKIEPKVEHYGCMV 448



 Score = 45.8 bits (107), Expect(2) = 3e-41
 Identities = 22/27 (81%), Positives = 23/27 (85%)
 Frame = +3

Query: 3   DVLLSTSLLTMYAKCGAMDLAREVFSE 83
           DVLL T LLTMYAKCGAMDLA+ VF E
Sbjct: 338 DVLLLTCLLTMYAKCGAMDLAKGVFDE 364


>ref|XP_002329535.1| predicted protein [Populus trichocarpa] gi|222870244|gb|EEF07375.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  128 bits (322), Expect(2) = 9e-37
 Identities = 54/76 (71%), Positives = 65/76 (85%)
 Frame = +2

Query: 104 WNSMIMGYGMHGYGEKALEMFLEMEKSGETPNGATFVCVLSACTHAGLVLEGWWYFDLMK 283
           WNSMI+GYG+HG+G+KALEMF EMEK G  PN ATF+ VLSAC+H+G+V  GWWYFDLM 
Sbjct: 421 WNSMIIGYGIHGHGDKALEMFREMEKGGPMPNDATFMSVLSACSHSGMVWNGWWYFDLMH 480

Query: 284 RVYKIEPKVEHYGCMV 331
           R Y+I+PK EHYGC+V
Sbjct: 481 RKYRIQPKPEHYGCLV 496



 Score = 50.1 bits (118), Expect(2) = 9e-37
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +3

Query: 3   DVLLSTSLLTMYAKCGAMDLAREVFSE 83
           D+LLST+LLTMYAKCGAMDLAREVF +
Sbjct: 386 DMLLSTALLTMYAKCGAMDLAREVFDK 412


>ref|XP_003561223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 604

 Score =  126 bits (317), Expect(2) = 1e-34
 Identities = 54/76 (71%), Positives = 61/76 (80%)
 Frame = +2

Query: 104 WNSMIMGYGMHGYGEKALEMFLEMEKSGETPNGATFVCVLSACTHAGLVLEGWWYFDLMK 283
           WNSMI+GYG+HG  EKALE+FLEMEKSG  PN  TF+CVLS+C H GLVLEGWW FD M 
Sbjct: 386 WNSMIIGYGLHGQSEKALELFLEMEKSGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMV 445

Query: 284 RVYKIEPKVEHYGCMV 331
           R Y  EPK EH+GCM+
Sbjct: 446 RFYGFEPKAEHFGCMM 461



 Score = 44.7 bits (104), Expect(2) = 1e-34
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 3   DVLLSTSLLTMYAKCGAMDLAREVF 77
           DVLL T+LLTMYAKCGAM+ ARE+F
Sbjct: 351 DVLLLTALLTMYAKCGAMETAREIF 375