BLASTX nr result

ID: Coptis21_contig00033068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033068
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279793.1| PREDICTED: uncharacterized protein At2g39920...    64   1e-08
ref|XP_002315179.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002279793.1| PREDICTED: uncharacterized protein At2g39920 [Vitis vinifera]
           gi|296086101|emb|CBI31542.3| unnamed protein product
           [Vitis vinifera]
          Length = 308

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = +1

Query: 1   RRAELQDFGYRITSVISSNMAALTGPCLGKRVFKLPSPLLYKLEHHVNS 147
           +R  +Q  G+RIT+VIS +M ALTGP LGKR+FKLP+P+ YK + H+ S
Sbjct: 255 QRGVIQKEGFRITAVISGHMDALTGPSLGKRIFKLPNPMYYKFDDHIES 303


>ref|XP_002315179.1| predicted protein [Populus trichocarpa] gi|222864219|gb|EEF01350.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/49 (53%), Positives = 32/49 (65%)
 Frame = +1

Query: 1   RRAELQDFGYRITSVISSNMAALTGPCLGKRVFKLPSPLLYKLEHHVNS 147
           R   +Q  G+RI+ VISS M ALT   LG RVFKLP+P+ Y  EHH  +
Sbjct: 232 RMVAMQKAGFRISGVISSQMDALTSASLGHRVFKLPNPVYYNFEHHTGN 280


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