BLASTX nr result

ID: Coptis21_contig00033061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033061
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313503.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002275500.2| PREDICTED: E3 ubiquitin-protein ligase PUB23...   116   2e-24
emb|CBI24432.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002308325.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002336518.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24

>ref|XP_002313503.1| predicted protein [Populus trichocarpa] gi|222849911|gb|EEE87458.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/82 (68%), Positives = 71/82 (86%)
 Frame = -1

Query: 309 RVSQIASERAVRILYSVSKFSATSSVLQEMLQVGVVSKLSLVLQVECTLKTKEKAKEIFK 130
           RVS +AS++AVRILYS+ +FSATS VLQEMLQVGVV+KL LVLQV+ + K+KE+A+EI K
Sbjct: 333 RVSHVASDKAVRILYSICRFSATSRVLQEMLQVGVVAKLCLVLQVDSSFKSKERAREILK 392

Query: 129 LHSRVWKNSSCIPPFFFSSYLS 64
           LHSRVW+NS+C+P +  SSY S
Sbjct: 393 LHSRVWRNSACVPAYLMSSYPS 414


>ref|XP_002275500.2| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 414

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/82 (74%), Positives = 68/82 (82%)
 Frame = -1

Query: 309 RVSQIASERAVRILYSVSKFSATSSVLQEMLQVGVVSKLSLVLQVECTLKTKEKAKEIFK 130
           RVSQ+ ++RAV+IL SVSKFSATS VLQEMLQVGVVSKL LVLQV+ + KTKEK +EI  
Sbjct: 332 RVSQVGTDRAVKILASVSKFSATSRVLQEMLQVGVVSKLCLVLQVDSSKKTKEKTREILN 391

Query: 129 LHSRVWKNSSCIPPFFFSSYLS 64
           LHSRVWKN SCIP   FSSY S
Sbjct: 392 LHSRVWKNPSCIPARLFSSYPS 413


>emb|CBI24432.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/82 (74%), Positives = 68/82 (82%)
 Frame = -1

Query: 309 RVSQIASERAVRILYSVSKFSATSSVLQEMLQVGVVSKLSLVLQVECTLKTKEKAKEIFK 130
           RVSQ+ ++RAV+IL SVSKFSATS VLQEMLQVGVVSKL LVLQV+ + KTKEK +EI  
Sbjct: 285 RVSQVGTDRAVKILASVSKFSATSRVLQEMLQVGVVSKLCLVLQVDSSKKTKEKTREILN 344

Query: 129 LHSRVWKNSSCIPPFFFSSYLS 64
           LHSRVWKN SCIP   FSSY S
Sbjct: 345 LHSRVWKNPSCIPARLFSSYPS 366


>ref|XP_002308325.1| predicted protein [Populus trichocarpa] gi|222854301|gb|EEE91848.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/80 (67%), Positives = 69/80 (86%)
 Frame = -1

Query: 309 RVSQIASERAVRILYSVSKFSATSSVLQEMLQVGVVSKLSLVLQVECTLKTKEKAKEIFK 130
           RVSQ+ASERAVRI+ S+SK+S T+SVLQEMLQ+G+V+KL LVLQV+C  KTK+KA+E+ K
Sbjct: 332 RVSQVASERAVRIILSISKYSTTTSVLQEMLQIGIVAKLCLVLQVDCGSKTKDKAREVLK 391

Query: 129 LHSRVWKNSSCIPPFFFSSY 70
           +H+RVWK+S CIP    SSY
Sbjct: 392 IHARVWKSSRCIPANLLSSY 411


>ref|XP_002336518.1| predicted protein [Populus trichocarpa] gi|222835821|gb|EEE74256.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/80 (67%), Positives = 69/80 (86%)
 Frame = -1

Query: 309 RVSQIASERAVRILYSVSKFSATSSVLQEMLQVGVVSKLSLVLQVECTLKTKEKAKEIFK 130
           RVSQ+ASERAVRI+ S+SK+S T+SVLQEMLQ+G+V+KL LVLQV+C  KTK+KA+E+ K
Sbjct: 332 RVSQVASERAVRIILSISKYSTTTSVLQEMLQIGIVAKLCLVLQVDCGSKTKDKAREVLK 391

Query: 129 LHSRVWKNSSCIPPFFFSSY 70
           +H+RVWK+S CIP    SSY
Sbjct: 392 IHARVWKSSRCIPANLLSSY 411


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