BLASTX nr result

ID: Coptis21_contig00033059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033059
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272358.2| PREDICTED: TBC1 domain family member 25-like...    59   3e-07
emb|CBI37143.3| unnamed protein product [Vitis vinifera]               59   3e-07
ref|NP_179634.2| RabGAP/TBC domain-containing protein [Arabidops...    58   9e-07
ref|XP_003542429.1| PREDICTED: TBC1 domain family member 15-like...    58   9e-07
ref|XP_003536945.1| PREDICTED: TBC1 domain family member 15-like...    58   9e-07

>ref|XP_002272358.2| PREDICTED: TBC1 domain family member 25-like [Vitis vinifera]
          Length = 451

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +1

Query: 1   KGLDDVVKILNDIILSLDAKKACKEALKVQKKFLSKAR 114
           KGLDDVVKIL DI  +LDAKKAC EALK+ KK+LSKA+
Sbjct: 412 KGLDDVVKILGDITGNLDAKKACNEALKLHKKYLSKAK 449


>emb|CBI37143.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +1

Query: 1   KGLDDVVKILNDIILSLDAKKACKEALKVQKKFLSKAR 114
           KGLDDVVKIL DI  +LDAKKAC EALK+ KK+LSKA+
Sbjct: 447 KGLDDVVKILGDITGNLDAKKACNEALKLHKKYLSKAK 484


>ref|NP_179634.2| RabGAP/TBC domain-containing protein [Arabidopsis thaliana]
           gi|238479300|ref|NP_001154525.1| RabGAP/TBC
           domain-containing protein [Arabidopsis thaliana]
           gi|330251913|gb|AEC07007.1| RabGAP/TBC domain-containing
           protein [Arabidopsis thaliana]
           gi|330251914|gb|AEC07008.1| RabGAP/TBC domain-containing
           protein [Arabidopsis thaliana]
          Length = 425

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +1

Query: 1   KGLDDVVKILNDIILSLDAKKACKEALKVQKKFLSKA 111
           KGLDDVV+IL DI  +LDAKKACKEALK+ +KFL KA
Sbjct: 384 KGLDDVVQILGDIAGNLDAKKACKEALKIHEKFLKKA 420


>ref|XP_003542429.1| PREDICTED: TBC1 domain family member 15-like [Glycine max]
          Length = 413

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +1

Query: 1   KGLDDVVKILNDIILSLDAKKACKEALKVQKKFLSKAR 114
           KG+DDVVKIL DI  +LDAKKA  EALK+QKK+LSKA+
Sbjct: 374 KGVDDVVKILGDITSNLDAKKALNEALKIQKKYLSKAK 411


>ref|XP_003536945.1| PREDICTED: TBC1 domain family member 15-like [Glycine max]
          Length = 424

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +1

Query: 1   KGLDDVVKILNDIILSLDAKKACKEALKVQKKFLSKAR 114
           KG+DDVVKIL DI  +LDAKKA  EALK+QKK+LSKA+
Sbjct: 385 KGVDDVVKILGDITSNLDAKKALNEALKIQKKYLSKAK 422


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