BLASTX nr result

ID: Coptis21_contig00033056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033056
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278632.2| PREDICTED: transcriptional activator Myb-lik...    75   1e-11
ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
emb|CAN76166.1| hypothetical protein VITISV_041798 [Vitis vinifera]    75   1e-11

>ref|XP_002278632.2| PREDICTED: transcriptional activator Myb-like [Vitis vinifera]
           gi|302142744|emb|CBI19947.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
 Frame = +2

Query: 17  ESSTILEFRKNYKDEVFQESPFNS---WHCSFP-GTSTTNSTPLKNFGTGQRDSFSTNSS 184
           E+S + EF    K+ +F  SP +S   W  +     +T NS+       G RD F++ SS
Sbjct: 157 ENSRLFEFLNPNKEGIFSISPSSSSPSWTFARSISKATNNSSSTDLLRRGGRDHFNSCSS 216

Query: 185 FCITERDXXXXXXXXXXXXXXXXXXX-----AAGINKYNKVVHHPYSCSSIADAYGSSGM 349
             I +                          A G   Y +VV  P   S + D +G   M
Sbjct: 217 DGIMDSQNSLDRSLYRYFSNSSAYGGYRTSTAFGFPNYKRVVSGPVGYSKLGDPHG---M 273

Query: 350 IKSDLVRFGDKLTTQSSRLRVTTQQEQGDESIKHKDVPFIDFLGVGIS 493
           +K + V FGD   T  +++ +T QQEQ DESIK K++PFIDFLGVGIS
Sbjct: 274 LKREFVNFGDNSPT-FAKMIMTNQQEQEDESIKQKNIPFIDFLGVGIS 320


>ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|222856923|gb|EEE94470.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 59/172 (34%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
 Frame = +2

Query: 17  ESSTILEFRKNYKDEVFQESPFNS---WHCSFPGT--STTNSTPLKNFGTGQRDSFSTNS 181
           + S +LEFR   KD +   SP  S   W+ + P T  ++ NS+ +       RD++  +S
Sbjct: 164 DDSRVLEFRNPGKDRILSISPSGSSPSWNFA-PSTIAASNNSSSVDLSRREGRDNYFNSS 222

Query: 182 SFCITERDXXXXXXXXXXXXXXXXXXXAA------GINKYNKVVHHPY-SCSSIADAYGS 340
            FC TE                     +       G+  Y +VV  P+ S   + D Y +
Sbjct: 223 LFCTTESSKLISDQPIYRYYTNSSVCGSYRSSSIFGLPNYRRVVPSPFGSYLKLGDDYEN 282

Query: 341 SGMIKSDLVRFGDKLTTQSSRLRVTTQQEQGD-ESIKHKDVPFIDFLGVGIS 493
            GMIK +L    +  T  + R   +  QE+GD ESIKHKD PFIDFLGVGIS
Sbjct: 283 HGMIKKELASCHNSSTLNNLRA-TSNHQEKGDHESIKHKDAPFIDFLGVGIS 333


>emb|CAN76166.1| hypothetical protein VITISV_041798 [Vitis vinifera]
          Length = 320

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
 Frame = +2

Query: 17  ESSTILEFRKNYKDEVFQESPFNS---WHCSFP-GTSTTNSTPLKNFGTGQRDSFSTNSS 184
           E+S + EF    K+ +F  SP +S   W  +     +T NS+       G RD F++ SS
Sbjct: 156 ENSRLFEFLNPNKEGIFSISPSSSSPSWTFARSISKATNNSSSTDLXRRGGRDHFNSCSS 215

Query: 185 FCITERDXXXXXXXXXXXXXXXXXXX-----AAGINKYNKVVHHPYSCSSIADAYGSSGM 349
             I +                          A G   Y +VV  P   S + D +G   M
Sbjct: 216 DGIMDSQNSLDRSLYRYFSNSSAYGGYRTSTAFGFPNYKRVVSGPVGYSKLGDPHG---M 272

Query: 350 IKSDLVRFGDKLTTQSSRLRVTTQQEQGDESIKHKDVPFIDFLGVGIS 493
           +K + V FGD   T  +++ +T QQEQ DESIK K++PFIDFLGVGIS
Sbjct: 273 LKREFVNFGDNSPT-FAKMIMTNQQEQEDESIKQKNIPFIDFLGVGIS 319


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