BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033049
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309782.1| GRAS family transcription factor [Populus tr...   223   1e-56
ref|XP_002327997.1| GRAS family transcription factor [Populus tr...   223   2e-56
emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]   220   9e-56
ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifer...   220   1e-55
ref|XP_003543573.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...   212   3e-53

>ref|XP_002309782.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222852685|gb|EEE90232.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 411

 Score =  223 bits (569), Expect = 1e-56
 Identities = 113/180 (62%), Positives = 139/180 (77%), Gaps = 1/180 (0%)
 Frame = -3

Query: 537 LSREELGVQDDEAVAVNCVGALRRVITEERDEVVRMLYALKPKVVTVVEEEADFTSSRDD 358
           L+++ LGVQ+DEAVA+NC GALRRV  EER+ V++M  +L P+VVT+VEEEADFTSSR D
Sbjct: 225 LTKDRLGVQEDEAVAINCNGALRRVGVEERNSVIQMFQSLNPRVVTIVEEEADFTSSRYD 284

Query: 357 FMKCFEECLRFYTYYFEMLEESFVPTSNERLMLERECSRSIISVLACXXXXXXXXXXXXX 178
           F+KCFEECLR+YT YFEMLEESFVPTSNERLMLERECSR+I+ VLAC             
Sbjct: 285 FVKCFEECLRYYTLYFEMLEESFVPTSNERLMLERECSRNIVRVLACDEGNDGGECERRE 344

Query: 177 XGTQWSEKLKVSFTPFLYSXXXXXXVKALLKRYRSGWSLQPAQGE-DAGLYLAWKEEAVV 1
            G+QW E+L+ +F+P  +S      VKALLKRYR+GW+L   QG+ D+G+YL WKEE VV
Sbjct: 345 RGSQWFERLREAFSPVGFSDDVVDDVKALLKRYRAGWALVLPQGDHDSGIYLTWKEEPVV 404


>ref|XP_002327997.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222837406|gb|EEE75785.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 411

 Score =  223 bits (567), Expect = 2e-56
 Identities = 111/180 (61%), Positives = 139/180 (77%), Gaps = 1/180 (0%)
 Frame = -3

Query: 537 LSREELGVQDDEAVAVNCVGALRRVITEERDEVVRMLYALKPKVVTVVEEEADFTSSRDD 358
           L++E LGVQ+DEAVA+NC+GALRRV  +ER  V+++  +L P+VVT+VEEEADFTSSR D
Sbjct: 225 LTKEGLGVQEDEAVAINCIGALRRVEVDERSSVIQLFRSLNPRVVTIVEEEADFTSSRYD 284

Query: 357 FMKCFEECLRFYTYYFEMLEESFVPTSNERLMLERECSRSIISVLACXXXXXXXXXXXXX 178
           F+KCFEECLR+YT YFEMLEESFVPTSNERLMLERECSR+I+ VLAC             
Sbjct: 285 FVKCFEECLRYYTLYFEMLEESFVPTSNERLMLERECSRNIVRVLACDEETGGGECERRE 344

Query: 177 XGTQWSEKLKVSFTPFLYSXXXXXXVKALLKRYRSGWSLQPAQGE-DAGLYLAWKEEAVV 1
            G QWSE+L+ +F+P  +S      VKALLKRY++GW+L   QG+ ++G+YL WKEE VV
Sbjct: 345 RGVQWSERLREAFSPVGFSDDVVDDVKALLKRYKAGWALVLPQGDHESGIYLTWKEEPVV 404


>emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]
          Length = 436

 Score =  220 bits (561), Expect = 9e-56
 Identities = 120/184 (65%), Positives = 138/184 (75%), Gaps = 5/184 (2%)
 Frame = -3

Query: 537 LSREELGVQDDEAVAVNCVGALRRVITEERDEVVRMLYALKPKVVTVVEEEADFTSSRDD 358
           L++E LGV+DDEAVAVNC+GALRRV  EER  V++ L +L P+VVTVVEEEADF+SSR+D
Sbjct: 246 LTKEGLGVRDDEAVAVNCIGALRRVEVEERRRVIQTLQSLGPRVVTVVEEEADFSSSRND 305

Query: 357 FMKCFEECLRFYTYYFEMLEESFVPTSNERLMLERECSRSIISVLAC--XXXXXXXXXXX 184
           F+KCFEECLRFYT YFEMLEESFVPTSNERLMLERECSRSI+ VLAC             
Sbjct: 306 FVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSRSIVRVLACDDIEDDTGEDCER 365

Query: 183 XXXGTQWSEKLKVSFTPFLYSXXXXXXVKALLKRYRSGWSL-QPAQGED--AGLYLAWKE 13
              G QWSE LK  F+P  +S      VKALLKRYRSGW+L  P QGE+   G+YL WK+
Sbjct: 366 REKGIQWSEGLKEXFSPLGFSEDVVDDVKALLKRYRSGWALVPPQQGENHQLGIYLTWKD 425

Query: 12  EAVV 1
           E VV
Sbjct: 426 EPVV 429


>ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifera]
           gi|296081342|emb|CBI17688.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score =  220 bits (560), Expect = 1e-55
 Identities = 120/184 (65%), Positives = 138/184 (75%), Gaps = 5/184 (2%)
 Frame = -3

Query: 537 LSREELGVQDDEAVAVNCVGALRRVITEERDEVVRMLYALKPKVVTVVEEEADFTSSRDD 358
           L++E LGV+DDEAVAVNC+GALRRV  EER  V++ L +L P+VVTVVEEEADF+SSR+D
Sbjct: 246 LTKEGLGVRDDEAVAVNCIGALRRVEVEERRRVIQTLQSLGPRVVTVVEEEADFSSSRND 305

Query: 357 FMKCFEECLRFYTYYFEMLEESFVPTSNERLMLERECSRSIISVLAC--XXXXXXXXXXX 184
           F+KCFEECLRFYT YFEMLEESFVPTSNERLMLERECSRSI+ VLAC             
Sbjct: 306 FVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSRSIVRVLACDDIEDDTGEDCER 365

Query: 183 XXXGTQWSEKLKVSFTPFLYSXXXXXXVKALLKRYRSGWSL-QPAQGED--AGLYLAWKE 13
              G QWSE LK  F+P  +S      VKALLKRYRSGW+L  P QGE+   G+YL WK+
Sbjct: 366 REKGIQWSEGLKEVFSPLGFSEDVVDDVKALLKRYRSGWALVPPQQGENHQLGIYLTWKD 425

Query: 12  EAVV 1
           E VV
Sbjct: 426 EPVV 429


>ref|XP_003543573.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 443

 Score =  212 bits (540), Expect = 3e-53
 Identities = 113/189 (59%), Positives = 136/189 (71%), Gaps = 10/189 (5%)
 Frame = -3

Query: 537 LSREELGVQDDEAVAVNCVGALRRVITEERDEVVRMLYALKPKVVTVVEEEADFTSSRDD 358
           +++E LGVQ+DEA+AVNCVGALRRV  EER+ ++R+  +L PKVVTVVEEEADF SSR D
Sbjct: 248 ITKEGLGVQEDEAIAVNCVGALRRVQVEERENLIRVFKSLGPKVVTVVEEEADFCSSRGD 307

Query: 357 FMKCFEECLRFYTYYFEMLEESFVPTSNERLMLERECSRSIISVLAC--------XXXXX 202
           F KCFEECL+FYT YFEML+ESF PTSNERLMLERECSRSI+ VLAC             
Sbjct: 308 FFKCFEECLKFYTLYFEMLKESFPPTSNERLMLERECSRSIVRVLACCGTGHEFEDDHGE 367

Query: 201 XXXXXXXXXGTQWSEKLKVSFTPFLYSXXXXXXVKALLKRYRSGWSLQPAQGED--AGLY 28
                    G QW E+L+ +F+P  +S      VKALLKRY+SGWSL   QG++  +G+Y
Sbjct: 368 FDCCERRERGIQWCERLRNAFSPSGFSDDVVDDVKALLKRYQSGWSLVVTQGDEHISGIY 427

Query: 27  LAWKEEAVV 1
           L WKEE VV
Sbjct: 428 LTWKEEPVV 436