BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033031
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531657.1| X-ray repair cross complementing protein 3, ...    80   2e-13
ref|XP_002324475.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog ...    80   2e-13
emb|CBI17834.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog ...    77   2e-12

>ref|XP_002531657.1| X-ray repair cross complementing protein 3, xrcc3, putative
           [Ricinus communis] gi|223528715|gb|EEF30727.1| X-ray
           repair cross complementing protein 3, xrcc3, putative
           [Ricinus communis]
          Length = 301

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/68 (58%), Positives = 48/68 (70%)
 Frame = +3

Query: 3   PALGLSWANCVNTRLFLSRNXXXXXXXXXXXXXXXXXRTRRKLQVVFAPHLPESSCEYVV 182
           PALGL+WANCVN+RLFLSR+                 +TRR+L VVFAPHLP SSCE+V+
Sbjct: 234 PALGLAWANCVNSRLFLSRDENGMVDGAESGSFCS--QTRRRLHVVFAPHLPYSSCEFVI 291

Query: 183 LREGVFGL 206
            REGVFG+
Sbjct: 292 RREGVFGI 299


>ref|XP_002324475.1| predicted protein [Populus trichocarpa] gi|222865909|gb|EEF03040.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/68 (55%), Positives = 46/68 (67%)
 Frame = +3

Query: 3   PALGLSWANCVNTRLFLSRNXXXXXXXXXXXXXXXXXRTRRKLQVVFAPHLPESSCEYVV 182
           PALGLSWANCVN+RLFLS++                  TRR+L VVFAPHLP+ SCE+V+
Sbjct: 221 PALGLSWANCVNSRLFLSKDEYESGLVGGGESGFLSRETRRRLHVVFAPHLPDLSCEFVI 280

Query: 183 LREGVFGL 206
            REGV G+
Sbjct: 281 RREGVVGV 288


>ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog [Cucumis sativus]
           gi|449506730|ref|XP_004162832.1| PREDICTED: DNA repair
           protein XRCC3 homolog [Cucumis sativus]
          Length = 294

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/71 (59%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
 Frame = +3

Query: 3   PALGLSWANCVNTRLFLSRNXXXXXXXXXXXXXXXXX---RTRRKLQVVFAPHLPESSCE 173
           PALGL+WANCVN+RLFLSRN                    RTRR L VVFAPHLP+SSCE
Sbjct: 221 PALGLAWANCVNSRLFLSRNEEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCE 280

Query: 174 YVVLREGVFGL 206
           YV+ REGV G+
Sbjct: 281 YVINREGVVGV 291


>emb|CBI17834.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/71 (56%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
 Frame = +3

Query: 6   ALGLSWANCVNTRLFLSRNXXXXXXXXXXXXXXXXXR----TRRKLQVVFAPHLPESSCE 173
           ALGLSWANCVN+RLFLSRN                      TRR L V+FAPHLPESSCE
Sbjct: 188 ALGLSWANCVNSRLFLSRNEEIVGEVTGLGGVGAGDTVSRLTRRHLHVIFAPHLPESSCE 247

Query: 174 YVVLREGVFGL 206
           +V+ REGV G+
Sbjct: 248 FVISREGVLGV 258


>ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog [Vitis vinifera]
          Length = 300

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/71 (56%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
 Frame = +3

Query: 6   ALGLSWANCVNTRLFLSRNXXXXXXXXXXXXXXXXXR----TRRKLQVVFAPHLPESSCE 173
           ALGLSWANCVN+RLFLSRN                      TRR L V+FAPHLPESSCE
Sbjct: 228 ALGLSWANCVNSRLFLSRNEEIVGEVTGLGGVGAGDTVSRLTRRHLHVIFAPHLPESSCE 287

Query: 174 YVVLREGVFGL 206
           +V+ REGV G+
Sbjct: 288 FVISREGVLGV 298