BLASTX nr result

ID: Coptis21_contig00033029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033029
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632458.1| PREDICTED: uncharacterized protein LOC100248...   116   2e-24
emb|CBI40978.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002310767.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002306447.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_002522372.1| GTP-binding  protein alpha subunit, gna, put...   108   3e-22

>ref|XP_003632458.1| PREDICTED: uncharacterized protein LOC100248291 [Vitis vinifera]
          Length = 918

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/90 (66%), Positives = 73/90 (81%)
 Frame = -3

Query: 272 LSLPIPSSKIVNPSAEEVNILVSGAIPEYLKQRALQKLLLVGYDGSGTSTIFKQAKMLYK 93
           LSLP+PS K ++PS E+VN  V+  +P+YL+QR LQKLLL+G +GSGTSTIFKQAK+LYK
Sbjct: 474 LSLPVPS-KFLSPSGEQVNNFVTRTVPDYLEQRTLQKLLLIGNNGSGTSTIFKQAKILYK 532

Query: 92  AEPFSEHELQDIKFIIQRNVYTYLCILLEG 3
           A PFSE E ++IK  IQ NVY YL ILLEG
Sbjct: 533 ATPFSEDERENIKLKIQSNVYGYLGILLEG 562


>emb|CBI40978.3| unnamed protein product [Vitis vinifera]
          Length = 755

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/90 (66%), Positives = 73/90 (81%)
 Frame = -3

Query: 272 LSLPIPSSKIVNPSAEEVNILVSGAIPEYLKQRALQKLLLVGYDGSGTSTIFKQAKMLYK 93
           LSLP+PS K ++PS E+VN  V+  +P+YL+QR LQKLLL+G +GSGTSTIFKQAK+LYK
Sbjct: 311 LSLPVPS-KFLSPSGEQVNNFVTRTVPDYLEQRTLQKLLLIGNNGSGTSTIFKQAKILYK 369

Query: 92  AEPFSEHELQDIKFIIQRNVYTYLCILLEG 3
           A PFSE E ++IK  IQ NVY YL ILLEG
Sbjct: 370 ATPFSEDERENIKLKIQSNVYGYLGILLEG 399


>ref|XP_002310767.1| predicted protein [Populus trichocarpa] gi|222853670|gb|EEE91217.1|
           predicted protein [Populus trichocarpa]
          Length = 901

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/90 (65%), Positives = 70/90 (77%)
 Frame = -3

Query: 272 LSLPIPSSKIVNPSAEEVNILVSGAIPEYLKQRALQKLLLVGYDGSGTSTIFKQAKMLYK 93
           LSLP+PS K  N   E+VN L+S ++P+YL+QR L KLLLVGY GSGTSTIFKQAK+LYK
Sbjct: 466 LSLPVPS-KPSNSCGEQVNSLISRSVPDYLEQRTLLKLLLVGYSGSGTSTIFKQAKILYK 524

Query: 92  AEPFSEHELQDIKFIIQRNVYTYLCILLEG 3
             PF+E E ++IK  IQ NVY YL ILLEG
Sbjct: 525 PVPFTEDERENIKLTIQSNVYGYLGILLEG 554


>ref|XP_002306447.1| predicted protein [Populus trichocarpa] gi|222855896|gb|EEE93443.1|
           predicted protein [Populus trichocarpa]
          Length = 886

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/90 (65%), Positives = 70/90 (77%)
 Frame = -3

Query: 272 LSLPIPSSKIVNPSAEEVNILVSGAIPEYLKQRALQKLLLVGYDGSGTSTIFKQAKMLYK 93
           LSLP+PS K  N   E+VN L+S +IP+YL+QR L KLLLVG+ GSGTSTIFKQAK+LYK
Sbjct: 440 LSLPVPS-KPSNSCGEQVNSLISRSIPDYLEQRTLLKLLLVGFSGSGTSTIFKQAKILYK 498

Query: 92  AEPFSEHELQDIKFIIQRNVYTYLCILLEG 3
             PF+E E ++IK  IQ NVY YL ILLEG
Sbjct: 499 PVPFTEDERENIKLTIQSNVYGYLGILLEG 528


>ref|XP_002522372.1| GTP-binding  protein alpha subunit, gna, putative [Ricinus
           communis] gi|223538450|gb|EEF40056.1| GTP-binding
           protein alpha subunit, gna, putative [Ricinus communis]
          Length = 917

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/90 (64%), Positives = 70/90 (77%)
 Frame = -3

Query: 272 LSLPIPSSKIVNPSAEEVNILVSGAIPEYLKQRALQKLLLVGYDGSGTSTIFKQAKMLYK 93
           LSLP+PS K  N   E+VN  VS ++P+YL+QR L K+LLVGY+GSGTSTIFKQAK+LYK
Sbjct: 473 LSLPVPS-KSSNSLGEQVNSGVSRSVPDYLEQRTLLKILLVGYNGSGTSTIFKQAKILYK 531

Query: 92  AEPFSEHELQDIKFIIQRNVYTYLCILLEG 3
             PF+E E ++IK  IQ NVY YL ILLEG
Sbjct: 532 PVPFTEDERENIKLTIQSNVYGYLGILLEG 561


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