BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032919
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23583.3| unnamed protein product [Vitis vinifera]              218   3e-55
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...   218   3e-55
ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis ...   217   7e-55
ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabid...   216   1e-54
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...   215   3e-54

>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score =  218 bits (556), Expect = 3e-55
 Identities = 105/120 (87%), Positives = 114/120 (95%)
 Frame = +1

Query: 4    KLIQKPYDNGDERGMRLIKSILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIECKQSEAE 183
            KLIQKPY+ GD+RG+RLIK+ILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIEC+QSEAE
Sbjct: 795  KLIQKPYECGDQRGLRLIKAILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIECEQSEAE 854

Query: 184  RDFYEALFKRSKVQFDQFVAQGKVLHNYAHILELLLRLRQCCNHPFLVMSRADTQKYTDL 363
             DFY+ALFKRSKV+FDQFV QG+VLHNYA ILELLLRLRQCCNHPFLVMSR DTQ+Y DL
Sbjct: 855  HDFYDALFKRSKVRFDQFVEQGRVLHNYASILELLLRLRQCCNHPFLVMSRGDTQQYADL 914


>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Vitis vinifera]
          Length = 1224

 Score =  218 bits (556), Expect = 3e-55
 Identities = 105/120 (87%), Positives = 114/120 (95%)
 Frame = +1

Query: 4    KLIQKPYDNGDERGMRLIKSILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIECKQSEAE 183
            KLIQKPY+ GD+RG+RLIK+ILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIEC+QSEAE
Sbjct: 826  KLIQKPYECGDQRGLRLIKAILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIECEQSEAE 885

Query: 184  RDFYEALFKRSKVQFDQFVAQGKVLHNYAHILELLLRLRQCCNHPFLVMSRADTQKYTDL 363
             DFY+ALFKRSKV+FDQFV QG+VLHNYA ILELLLRLRQCCNHPFLVMSR DTQ+Y DL
Sbjct: 886  HDFYDALFKRSKVRFDQFVEQGRVLHNYASILELLLRLRQCCNHPFLVMSRGDTQQYADL 945


>ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297311253|gb|EFH41677.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1305

 Score =  217 bits (553), Expect = 7e-55
 Identities = 105/121 (86%), Positives = 115/121 (95%)
 Frame = +1

Query: 4    KLIQKPYDNGDERGMRLIKSILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIECKQSEAE 183
            KLIQKPY+NGD RG++LIK+ILRPLMLRRTK+T+DKEG  IL LPPTDIQVIEC+QSEAE
Sbjct: 909  KLIQKPYENGDSRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPTDIQVIECEQSEAE 968

Query: 184  RDFYEALFKRSKVQFDQFVAQGKVLHNYAHILELLLRLRQCCNHPFLVMSRADTQKYTDL 363
            RDFY ALFKRSKVQFDQFVAQGKVLHNYA+ILELLLRLRQCCNHPFLVMSRAD+Q+Y DL
Sbjct: 969  RDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADL 1028

Query: 364  D 366
            D
Sbjct: 1029 D 1029


>ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
            gi|60390960|sp|Q9FIY7.1|SM3L3_ARATH RecName:
            Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3; Short=SMARCA3-like protein 3
            gi|10178192|dbj|BAB11616.1| DNA repair protein-like
            [Arabidopsis thaliana] gi|332007595|gb|AED94978.1|
            Helicase protein with RING/U-box domain [Arabidopsis
            thaliana]
          Length = 1277

 Score =  216 bits (551), Expect = 1e-54
 Identities = 104/121 (85%), Positives = 115/121 (95%)
 Frame = +1

Query: 4    KLIQKPYDNGDERGMRLIKSILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIECKQSEAE 183
            KLIQKPY+NGD RG++LIK+ILRPLMLRRTK+T+DKEG  IL LPPTD+QVIEC+QSEAE
Sbjct: 881  KLIQKPYENGDPRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAE 940

Query: 184  RDFYEALFKRSKVQFDQFVAQGKVLHNYAHILELLLRLRQCCNHPFLVMSRADTQKYTDL 363
            RDFY ALFKRSKVQFDQFVAQGKVLHNYA+ILELLLRLRQCCNHPFLVMSRAD+Q+Y DL
Sbjct: 941  RDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADL 1000

Query: 364  D 366
            D
Sbjct: 1001 D 1001


>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 1051

 Score =  215 bits (547), Expect = 3e-54
 Identities = 101/121 (83%), Positives = 116/121 (95%)
 Frame = +1

Query: 4    KLIQKPYDNGDERGMRLIKSILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIECKQSEAE 183
            KLIQ+PY+NGD RGM+LIK+ILRPLMLRRTK+TKDKEGRPILVLPP DIQ+IEC+ SEAE
Sbjct: 653  KLIQRPYENGDPRGMKLIKAILRPLMLRRTKETKDKEGRPILVLPPMDIQIIECEHSEAE 712

Query: 184  RDFYEALFKRSKVQFDQFVAQGKVLHNYAHILELLLRLRQCCNHPFLVMSRADTQKYTDL 363
             DFY+ALF+RSKV+FDQFVAQGKVLHNYA ILELLLRLRQCCNHPFLV+SRAD+++YTDL
Sbjct: 713  HDFYDALFRRSKVKFDQFVAQGKVLHNYASILELLLRLRQCCNHPFLVLSRADSKQYTDL 772

Query: 364  D 366
            +
Sbjct: 773  N 773