BLASTX nr result

ID: Coptis21_contig00032706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032706
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vi...   134   1e-29
emb|CBI29830.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_003518134.1| PREDICTED: uncharacterized protein LOC100795...   101   6e-20
ref|XP_002529505.1| conserved hypothetical protein [Ricinus comm...   101   6e-20

>ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vinifera]
          Length = 1128

 Score =  134 bits (336), Expect = 1e-29
 Identities = 72/134 (53%), Positives = 95/134 (70%), Gaps = 2/134 (1%)
 Frame = -3

Query: 396 IPKEALPMNKAADAVDVLV-LFMEKQVGNNATLIRSVIKCLGSLVLFCDLKDWSRIQVPF 220
           +P +A+   KA +AV VLV L   +  G  A+ +R+V+KCLG LV FCDL+DW  + + F
Sbjct: 99  VPAQAITHPKAVEAVSVLVELLRSRGEGMAASSLRAVVKCLGVLVGFCDLEDWDSVSLGF 158

Query: 219 EIILRFSIDKRPKVRKCAQVCIEMVFKSFPG-SVVKEASKLFLSLFKSYMPRLIELNVKR 43
           E +L+FS+DKRPKVRKCAQ  +E VFKSF   +V KEASKL LSLFKSYMP  + LN  +
Sbjct: 159 ETLLKFSVDKRPKVRKCAQAFLERVFKSFQSTTVTKEASKLVLSLFKSYMPLAVRLNSLK 218

Query: 42  SIDDEMLSEPEHLE 1
           ++D    S+PE+LE
Sbjct: 219 TVDG---SKPENLE 229


>emb|CBI29830.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  134 bits (336), Expect = 1e-29
 Identities = 72/134 (53%), Positives = 95/134 (70%), Gaps = 2/134 (1%)
 Frame = -3

Query: 396 IPKEALPMNKAADAVDVLV-LFMEKQVGNNATLIRSVIKCLGSLVLFCDLKDWSRIQVPF 220
           +P +A+   KA +AV VLV L   +  G  A+ +R+V+KCLG LV FCDL+DW  + + F
Sbjct: 99  VPAQAITHPKAVEAVSVLVELLRSRGEGMAASSLRAVVKCLGVLVGFCDLEDWDSVSLGF 158

Query: 219 EIILRFSIDKRPKVRKCAQVCIEMVFKSFPG-SVVKEASKLFLSLFKSYMPRLIELNVKR 43
           E +L+FS+DKRPKVRKCAQ  +E VFKSF   +V KEASKL LSLFKSYMP  + LN  +
Sbjct: 159 ETLLKFSVDKRPKVRKCAQAFLERVFKSFQSTTVTKEASKLVLSLFKSYMPLAVRLNSLK 218

Query: 42  SIDDEMLSEPEHLE 1
           ++D    S+PE+LE
Sbjct: 219 TVDG---SKPENLE 229


>ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|222854916|gb|EEE92463.1|
           predicted protein [Populus trichocarpa]
          Length = 1177

 Score =  116 bits (291), Expect = 2e-24
 Identities = 66/138 (47%), Positives = 91/138 (65%), Gaps = 5/138 (3%)
 Frame = -3

Query: 399 LIPKEALPMNKAADAVDVLVLFMEKQVGNNATLIRSVIKCLGSLVL-FCDLKDWSRIQVP 223
           LI ++ +   K  +AV VLV    ++ G     +  V+KCLG ++L FCDL++W  ++  
Sbjct: 94  LIEEKGIKDAKVKEAVAVLVEVAVEREGVGVGSLGCVVKCLGVMILGFCDLEEWDSVKAG 153

Query: 222 FEIILRFSIDKRPKVRKCAQVCIEMVFKSF-PGSVVKEASKLFLSLFKSYMPRLIELNVK 46
           FE +++FS+DKRPKVR+ AQ C+E VFKSF   SVVKEASKL  SLFK+YMP  + L+  
Sbjct: 154 FESLIKFSVDKRPKVRRSAQDCLEKVFKSFRSSSVVKEASKLVFSLFKNYMPVALTLSES 213

Query: 45  RSID---DEMLSEPEHLE 1
           R  D   +E LS+ EHLE
Sbjct: 214 RIFDESKEETLSKLEHLE 231


>ref|XP_003518134.1| PREDICTED: uncharacterized protein LOC100795433 [Glycine max]
          Length = 1156

 Score =  101 bits (252), Expect = 6e-20
 Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 5/138 (3%)
 Frame = -3

Query: 399 LIPKEALPMNKAADAVDVLVLFMEKQ-VGNNATLIRSVIKCLGSLVLFCDLKDWSRIQVP 223
           L+P   +   K+ +A  +L++ + ++  G     +R+++KCLG L+ FCDL+DW  I++ 
Sbjct: 90  LVPPGGIAALKSHEAAAILIVALAREGEGVGVACVRAMVKCLGVLIGFCDLEDWDGIRLG 149

Query: 222 FEIILRFSIDKRPKVRKCAQVCIEMVFKSFPGS-VVKEASKLFLSLFKSYMPRLIELNVK 46
           FE +L+FSI KRPKVR+CAQ  +E VFKS   S V KEASK  LS  KS     ++LN  
Sbjct: 150 FETLLKFSICKRPKVRRCAQESVEKVFKSIKSSTVTKEASKFVLSELKSCSALALKLNAL 209

Query: 45  RSID---DEMLSEPEHLE 1
            + D   ++ + + EHLE
Sbjct: 210 STSDECKEDKVLKHEHLE 227


>ref|XP_002529505.1| conserved hypothetical protein [Ricinus communis]
           gi|223531021|gb|EEF32874.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1167

 Score =  101 bits (252), Expect = 6e-20
 Identities = 61/139 (43%), Positives = 87/139 (62%), Gaps = 6/139 (4%)
 Frame = -3

Query: 399 LIPKEALPMNKAADAVDVLVLFMEKQVGN-NATLIRSVIKCLGSLVL-FCDLKDWSRIQV 226
           LIP++ +  ++A+ AV VLV  ME +     A  +  V+KCLG L++ FCDL+DWS +++
Sbjct: 97  LIPEKEINSDQASKAVQVLVEVMESEEFELGAASVSCVVKCLGILIVGFCDLEDWSSLKL 156

Query: 225 PFEIILRFSIDKRPKVRKCAQVCIEMVFKSFP-GSVVKEASKLFLSLFKSYMP---RLIE 58
            FE +L+  +DKRPKVR+ AQ C+E VFKS    +V++E+ KL     KSY      L E
Sbjct: 157 GFETVLKSCVDKRPKVRRGAQDCLEKVFKSLRYSTVIEESGKLVFLALKSYRAIALTLSE 216

Query: 57  LNVKRSIDDEMLSEPEHLE 1
           L V     D+ LSEP +LE
Sbjct: 217 LKVVDDSKDKTLSEPRNLE 235