BLASTX nr result

ID: Coptis21_contig00032514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032514
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631537.1| PREDICTED: F-box/LRR-repeat protein 10-like ...   192   3e-47
emb|CBI37811.3| unnamed protein product [Vitis vinifera]              192   3e-47
ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like ...   188   5e-46
ref|XP_002312937.1| f-box family protein [Populus trichocarpa] g...   185   3e-45
ref|XP_002306206.1| predicted protein [Populus trichocarpa] gi|2...   185   3e-45

>ref|XP_003631537.1| PREDICTED: F-box/LRR-repeat protein 10-like [Vitis vinifera]
          Length = 719

 Score =  192 bits (487), Expect = 3e-47
 Identities = 95/133 (71%), Positives = 112/133 (84%)
 Frame = -3

Query: 401 HLTTLEIGYIPSVMVTESLSPTLGXXXXXXHLRQCLIPSIQKLCLSVDYITDNMVGTISK 222
           +LT+LEIGY+ SVMVTE LSP +G      HL+  ++PS+Q+LCLSVDYITD MV T+SK
Sbjct: 184 NLTSLEIGYVSSVMVTELLSPNVGPHQPPNHLQPSILPSLQRLCLSVDYITDTMVETVSK 243

Query: 221 CLVNLIHLDLRDAPVLEPTGAFDLTNSGIQQINQSGKLKLLSLVRSQEYLHTYFKRVNDL 42
           CL+NL HLDLRDAP++EP   FDLTNSG QQINQ GKLK LSLVRSQE+L TYFKRVNDL
Sbjct: 244 CLINLTHLDLRDAPIIEPRVTFDLTNSGFQQINQRGKLKHLSLVRSQEFLITYFKRVNDL 303

Query: 41  GLLLMADKCSNME 3
           G+LLMAD+CS+ME
Sbjct: 304 GILLMADRCSSME 316


>emb|CBI37811.3| unnamed protein product [Vitis vinifera]
          Length = 1187

 Score =  192 bits (487), Expect = 3e-47
 Identities = 95/133 (71%), Positives = 112/133 (84%)
 Frame = -3

Query: 401  HLTTLEIGYIPSVMVTESLSPTLGXXXXXXHLRQCLIPSIQKLCLSVDYITDNMVGTISK 222
            +LT+LEIGY+ SVMVTE LSP +G      HL+  ++PS+Q+LCLSVDYITD MV T+SK
Sbjct: 758  NLTSLEIGYVSSVMVTELLSPNVGPHQPPNHLQPSILPSLQRLCLSVDYITDTMVETVSK 817

Query: 221  CLVNLIHLDLRDAPVLEPTGAFDLTNSGIQQINQSGKLKLLSLVRSQEYLHTYFKRVNDL 42
            CL+NL HLDLRDAP++EP   FDLTNSG QQINQ GKLK LSLVRSQE+L TYFKRVNDL
Sbjct: 818  CLINLTHLDLRDAPIIEPRVTFDLTNSGFQQINQRGKLKHLSLVRSQEFLITYFKRVNDL 877

Query: 41   GLLLMADKCSNME 3
            G+LLMAD+CS+ME
Sbjct: 878  GILLMADRCSSME 890


>ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like [Vitis vinifera]
          Length = 640

 Score =  188 bits (477), Expect = 5e-46
 Identities = 96/136 (70%), Positives = 112/136 (82%), Gaps = 3/136 (2%)
 Frame = -3

Query: 401 HLTTLEI---GYIPSVMVTESLSPTLGXXXXXXHLRQCLIPSIQKLCLSVDYITDNMVGT 231
           +LT+LEI   GY+ SVMVTE LSP +G      HLR  ++PS+Q+LCLSVDYITD MV T
Sbjct: 184 NLTSLEIAYIGYVSSVMVTELLSPNVGPHQPPNHLRPSILPSLQRLCLSVDYITDTMVET 243

Query: 230 ISKCLVNLIHLDLRDAPVLEPTGAFDLTNSGIQQINQSGKLKLLSLVRSQEYLHTYFKRV 51
           +SKCL+NL HLDLRDAP++EP   FDLTNSG QQINQ GKLK LSLVRSQE+L TYFKRV
Sbjct: 244 VSKCLINLTHLDLRDAPIIEPRVTFDLTNSGFQQINQRGKLKHLSLVRSQEFLITYFKRV 303

Query: 50  NDLGLLLMADKCSNME 3
           NDLG+LLMAD+CS+ME
Sbjct: 304 NDLGILLMADRCSSME 319


>ref|XP_002312937.1| f-box family protein [Populus trichocarpa]
           gi|222849345|gb|EEE86892.1| f-box family protein
           [Populus trichocarpa]
          Length = 644

 Score =  185 bits (470), Expect = 3e-45
 Identities = 94/132 (71%), Positives = 109/132 (82%)
 Frame = -3

Query: 398 LTTLEIGYIPSVMVTESLSPTLGXXXXXXHLRQCLIPSIQKLCLSVDYITDNMVGTISKC 219
           LT+LEIGY+ SVMVTE + P+LG      H+R  ++P IQKLCLSVDYITD MV TISK 
Sbjct: 186 LTSLEIGYVSSVMVTELVGPSLGPHQSPNHVRPSILPGIQKLCLSVDYITDTMVSTISKG 245

Query: 218 LVNLIHLDLRDAPVLEPTGAFDLTNSGIQQINQSGKLKLLSLVRSQEYLHTYFKRVNDLG 39
           L++L HLDLRDAP++EPT  FDLTNSG+QQINQ GKLK LSLVRSQE+  TYF+RVNDLG
Sbjct: 246 LMSLTHLDLRDAPLIEPTITFDLTNSGLQQINQHGKLKHLSLVRSQEFAITYFRRVNDLG 305

Query: 38  LLLMADKCSNME 3
           +LLMADKC NME
Sbjct: 306 MLLMADKCENME 317


>ref|XP_002306206.1| predicted protein [Populus trichocarpa] gi|222849170|gb|EEE86717.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  185 bits (470), Expect = 3e-45
 Identities = 94/132 (71%), Positives = 111/132 (84%)
 Frame = -3

Query: 398 LTTLEIGYIPSVMVTESLSPTLGXXXXXXHLRQCLIPSIQKLCLSVDYITDNMVGTISKC 219
           LT+LEIG + SVMVTE LSP+LG      H+R  ++P IQKLCLSVDYITD MV TIS  
Sbjct: 192 LTSLEIGCVSSVMVTELLSPSLGHHRSPNHVRPPILPGIQKLCLSVDYITDTMVSTISNV 251

Query: 218 LVNLIHLDLRDAPVLEPTGAFDLTNSGIQQINQSGKLKLLSLVRSQEYLHTYFKRVNDLG 39
           L++L HLDLRDAP++EP+ A+DLTNSG+QQINQ GKLK LSLVRSQE+L TYF+RVNDLG
Sbjct: 252 LMSLTHLDLRDAPLIEPSSAYDLTNSGLQQINQHGKLKHLSLVRSQEFLITYFRRVNDLG 311

Query: 38  LLLMADKCSNME 3
           +LLMADKC+NME
Sbjct: 312 MLLMADKCANME 323


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