BLASTX nr result
ID: Coptis21_contig00032514
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00032514 (406 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631537.1| PREDICTED: F-box/LRR-repeat protein 10-like ... 192 3e-47 emb|CBI37811.3| unnamed protein product [Vitis vinifera] 192 3e-47 ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like ... 188 5e-46 ref|XP_002312937.1| f-box family protein [Populus trichocarpa] g... 185 3e-45 ref|XP_002306206.1| predicted protein [Populus trichocarpa] gi|2... 185 3e-45 >ref|XP_003631537.1| PREDICTED: F-box/LRR-repeat protein 10-like [Vitis vinifera] Length = 719 Score = 192 bits (487), Expect = 3e-47 Identities = 95/133 (71%), Positives = 112/133 (84%) Frame = -3 Query: 401 HLTTLEIGYIPSVMVTESLSPTLGXXXXXXHLRQCLIPSIQKLCLSVDYITDNMVGTISK 222 +LT+LEIGY+ SVMVTE LSP +G HL+ ++PS+Q+LCLSVDYITD MV T+SK Sbjct: 184 NLTSLEIGYVSSVMVTELLSPNVGPHQPPNHLQPSILPSLQRLCLSVDYITDTMVETVSK 243 Query: 221 CLVNLIHLDLRDAPVLEPTGAFDLTNSGIQQINQSGKLKLLSLVRSQEYLHTYFKRVNDL 42 CL+NL HLDLRDAP++EP FDLTNSG QQINQ GKLK LSLVRSQE+L TYFKRVNDL Sbjct: 244 CLINLTHLDLRDAPIIEPRVTFDLTNSGFQQINQRGKLKHLSLVRSQEFLITYFKRVNDL 303 Query: 41 GLLLMADKCSNME 3 G+LLMAD+CS+ME Sbjct: 304 GILLMADRCSSME 316 >emb|CBI37811.3| unnamed protein product [Vitis vinifera] Length = 1187 Score = 192 bits (487), Expect = 3e-47 Identities = 95/133 (71%), Positives = 112/133 (84%) Frame = -3 Query: 401 HLTTLEIGYIPSVMVTESLSPTLGXXXXXXHLRQCLIPSIQKLCLSVDYITDNMVGTISK 222 +LT+LEIGY+ SVMVTE LSP +G HL+ ++PS+Q+LCLSVDYITD MV T+SK Sbjct: 758 NLTSLEIGYVSSVMVTELLSPNVGPHQPPNHLQPSILPSLQRLCLSVDYITDTMVETVSK 817 Query: 221 CLVNLIHLDLRDAPVLEPTGAFDLTNSGIQQINQSGKLKLLSLVRSQEYLHTYFKRVNDL 42 CL+NL HLDLRDAP++EP FDLTNSG QQINQ GKLK LSLVRSQE+L TYFKRVNDL Sbjct: 818 CLINLTHLDLRDAPIIEPRVTFDLTNSGFQQINQRGKLKHLSLVRSQEFLITYFKRVNDL 877 Query: 41 GLLLMADKCSNME 3 G+LLMAD+CS+ME Sbjct: 878 GILLMADRCSSME 890 >ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like [Vitis vinifera] Length = 640 Score = 188 bits (477), Expect = 5e-46 Identities = 96/136 (70%), Positives = 112/136 (82%), Gaps = 3/136 (2%) Frame = -3 Query: 401 HLTTLEI---GYIPSVMVTESLSPTLGXXXXXXHLRQCLIPSIQKLCLSVDYITDNMVGT 231 +LT+LEI GY+ SVMVTE LSP +G HLR ++PS+Q+LCLSVDYITD MV T Sbjct: 184 NLTSLEIAYIGYVSSVMVTELLSPNVGPHQPPNHLRPSILPSLQRLCLSVDYITDTMVET 243 Query: 230 ISKCLVNLIHLDLRDAPVLEPTGAFDLTNSGIQQINQSGKLKLLSLVRSQEYLHTYFKRV 51 +SKCL+NL HLDLRDAP++EP FDLTNSG QQINQ GKLK LSLVRSQE+L TYFKRV Sbjct: 244 VSKCLINLTHLDLRDAPIIEPRVTFDLTNSGFQQINQRGKLKHLSLVRSQEFLITYFKRV 303 Query: 50 NDLGLLLMADKCSNME 3 NDLG+LLMAD+CS+ME Sbjct: 304 NDLGILLMADRCSSME 319 >ref|XP_002312937.1| f-box family protein [Populus trichocarpa] gi|222849345|gb|EEE86892.1| f-box family protein [Populus trichocarpa] Length = 644 Score = 185 bits (470), Expect = 3e-45 Identities = 94/132 (71%), Positives = 109/132 (82%) Frame = -3 Query: 398 LTTLEIGYIPSVMVTESLSPTLGXXXXXXHLRQCLIPSIQKLCLSVDYITDNMVGTISKC 219 LT+LEIGY+ SVMVTE + P+LG H+R ++P IQKLCLSVDYITD MV TISK Sbjct: 186 LTSLEIGYVSSVMVTELVGPSLGPHQSPNHVRPSILPGIQKLCLSVDYITDTMVSTISKG 245 Query: 218 LVNLIHLDLRDAPVLEPTGAFDLTNSGIQQINQSGKLKLLSLVRSQEYLHTYFKRVNDLG 39 L++L HLDLRDAP++EPT FDLTNSG+QQINQ GKLK LSLVRSQE+ TYF+RVNDLG Sbjct: 246 LMSLTHLDLRDAPLIEPTITFDLTNSGLQQINQHGKLKHLSLVRSQEFAITYFRRVNDLG 305 Query: 38 LLLMADKCSNME 3 +LLMADKC NME Sbjct: 306 MLLMADKCENME 317 >ref|XP_002306206.1| predicted protein [Populus trichocarpa] gi|222849170|gb|EEE86717.1| predicted protein [Populus trichocarpa] Length = 643 Score = 185 bits (470), Expect = 3e-45 Identities = 94/132 (71%), Positives = 111/132 (84%) Frame = -3 Query: 398 LTTLEIGYIPSVMVTESLSPTLGXXXXXXHLRQCLIPSIQKLCLSVDYITDNMVGTISKC 219 LT+LEIG + SVMVTE LSP+LG H+R ++P IQKLCLSVDYITD MV TIS Sbjct: 192 LTSLEIGCVSSVMVTELLSPSLGHHRSPNHVRPPILPGIQKLCLSVDYITDTMVSTISNV 251 Query: 218 LVNLIHLDLRDAPVLEPTGAFDLTNSGIQQINQSGKLKLLSLVRSQEYLHTYFKRVNDLG 39 L++L HLDLRDAP++EP+ A+DLTNSG+QQINQ GKLK LSLVRSQE+L TYF+RVNDLG Sbjct: 252 LMSLTHLDLRDAPLIEPSSAYDLTNSGLQQINQHGKLKHLSLVRSQEFLITYFRRVNDLG 311 Query: 38 LLLMADKCSNME 3 +LLMADKC+NME Sbjct: 312 MLLMADKCANME 323