BLASTX nr result

ID: Coptis21_contig00032510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032510
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    51   5e-11
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    51   5e-11
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    42   5e-07
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    41   6e-07
emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera]    41   1e-06

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 50.8 bits (120), Expect(2) = 5e-11
 Identities = 31/108 (28%), Positives = 50/108 (46%)
 Frame = -3

Query: 331 PFHFCNFWMLHEDFDATLGSCWDIADHGSPPFMLTRKLKSLKGELKGWARSFCHDIQRLV 152
           PF F + WM H++F   +   WD    G P + L  KL+ LK ELK +  +   +I   V
Sbjct: 621 PFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNISDRV 680

Query: 151 VDTRAELESIQLRLHQNPFDSALSAQEFLTRGKLCELLKLEEADLYQR 8
            D + +++  Q  LH    +  L  +E     K    ++ EE+   Q+
Sbjct: 681 RDAKNKMDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQK 728



 Score = 41.2 bits (95), Expect(2) = 5e-11
 Identities = 21/50 (42%), Positives = 26/50 (52%)
 Frame = -2

Query: 521 SGCFYTWNSGGDSVRRWSKIDRCLVNSDWASIRLATKVEFLPPGHSDHSP 372
           SG  YTW++         K+DR LVN  W      ++  FLP G SDHSP
Sbjct: 557 SGMHYTWSNQCPENLIMRKLDRVLVNEKWNLKFPLSEARFLPSGMSDHSP 606


>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 50.8 bits (120), Expect(2) = 5e-11
 Identities = 31/103 (30%), Positives = 47/103 (45%)
 Frame = -3

Query: 331 PFHFCNFWMLHEDFDATLGSCWDIADHGSPPFMLTRKLKSLKGELKGWARSFCHDIQRLV 152
           PF F + WM H++F   +   WD    G P + L  KL+  K ELK +  +   +I   V
Sbjct: 244 PFRFFDMWMDHDEFMPLVKKVWDQNSGGCPMYQLCCKLRKQKQELKLFNMAHFSNISDRV 303

Query: 151 VDTRAELESIQLRLHQNPFDSALSAQEFLTRGKLCELLKLEEA 23
            D + E++  Q  LH    +  L  QE     K    ++ EE+
Sbjct: 304 KDAKNEMDKAQQALHTAHKNPTLCMQERDVVHKYASTVRAEES 346



 Score = 41.2 bits (95), Expect(2) = 5e-11
 Identities = 21/50 (42%), Positives = 26/50 (52%)
 Frame = -2

Query: 521 SGCFYTWNSGGDSVRRWSKIDRCLVNSDWASIRLATKVEFLPPGHSDHSP 372
           SG  YTW++         K+DR LVN  W      ++  FLP G SDHSP
Sbjct: 180 SGMHYTWSNQCPENLIMRKLDRVLVNEKWNLNFPLSEARFLPSGMSDHSP 229


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 42.4 bits (98), Expect(2) = 5e-07
 Identities = 22/50 (44%), Positives = 27/50 (54%)
 Frame = -2

Query: 521 SGCFYTWNSGGDSVRRWSKIDRCLVNSDWASIRLATKVEFLPPGHSDHSP 372
           SG  YTW++         K+DR LVN  W      ++V FLP G SDHSP
Sbjct: 164 SGMHYTWSNQCPENLIMRKLDRVLVNEKWNLNFPLSEVRFLPSGISDHSP 213



 Score = 36.2 bits (82), Expect(2) = 5e-07
 Identities = 30/108 (27%), Positives = 44/108 (40%)
 Frame = -3

Query: 331 PFHFCNFWMLHEDFDATLGSCWDIADHGSPPFMLTRKLKSLKGELKGWARSFCHDIQRLV 152
           PF F + WM     D   G C        P + L   LK LK ELK +  +   +I   V
Sbjct: 228 PFRFFDMWM-----DQNSGGC--------PMYQLCCNLKKLKQELKLFNMAHFSNISDRV 274

Query: 151 VDTRAELESIQLRLHQNPFDSALSAQEFLTRGKLCELLKLEEADLYQR 8
            D + E++  Q  LH    +  L  +E     K    ++ EE+   Q+
Sbjct: 275 KDAKNEMDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQK 322


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 41.2 bits (95), Expect(2) = 6e-07
 Identities = 21/50 (42%), Positives = 26/50 (52%)
 Frame = -2

Query: 521 SGCFYTWNSGGDSVRRWSKIDRCLVNSDWASIRLATKVEFLPPGHSDHSP 372
           SG  YTW++         K+DR LVN  W      ++  FLP G SDHSP
Sbjct: 704 SGMHYTWSNQCPENLIMRKLDRVLVNEKWNLKFPLSEARFLPSGMSDHSP 753



 Score = 37.0 bits (84), Expect(2) = 6e-07
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 331 PFHFCNFWMLHEDFDATLGSCWDIADHGSPPFMLTRKLKSLK 206
           PF F + WM H++F   +   WD    G P + L  KL+ LK
Sbjct: 768 PFRFFDMWMDHDEFMPLVKKVWDQNSGGCPMYQLCCKLRKLK 809


>emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera]
          Length = 996

 Score = 40.8 bits (94), Expect(2) = 1e-06
 Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = -3

Query: 349 TVRSYP-PFHFCNFWMLHEDFDATLGSCWD-IADHGSPPFMLTRKLKSLKGELKGWAR 182
           T+R  P PF F N W+  E F   + S W  I   GS  F L  KLK +K +LK W R
Sbjct: 124 TMRRGPSPFRFENMWLKVEGFQELIHSWWQGIEVRGSASFRLVTKLKVVKQKLKEWNR 181



 Score = 36.6 bits (83), Expect(2) = 1e-06
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = -2

Query: 509 YTWNSGGDSVRRWSKIDRCLVNSDWASIRLATKVEFLPPGHSDHSP 372
           YTW SGG + R W+++DR LV   W     +   + LP   SDH P
Sbjct: 73  YTW-SGGPNNRYWARLDRFLVTPSWMDQFSSVIQKRLPRPASDHFP 117


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