BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032500
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]    131   5e-29
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]    131   5e-29
gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]    109   2e-22
emb|CAN76371.1| hypothetical protein VITISV_011467 [Vitis vinifera]    98   8e-19
emb|CAN78930.1| hypothetical protein VITISV_008432 [Vitis vinifera]    97   1e-18

>gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 321

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/134 (46%), Positives = 90/134 (67%)
 Frame = +1

Query: 1   LQCPNHGLEKGRLIQILYEGLDFNSKAMIETMSTGDFCDKTVDEAWSFLEDIAEKVQQWE 180
           +QCP+HGLEK RL Q++YEGLD++SK  +E+M  GDF  K  DEAW FLE ++EK  QWE
Sbjct: 152 IQCPHHGLEKWRLCQVIYEGLDYSSKTSLESMCQGDFMRKNADEAWEFLESLSEKTMQWE 211

Query: 181 TSREPKKVASSTTKNVVFHVDKEFDANAKMAALTRRVEALELEKEAKPPAQVNNVESPGC 360
              + +  + S +K+    ++    + AKMA + RR+EALE+++ A  PAQ+N++ +PGC
Sbjct: 212 NC-DDRVSSVSQSKSSGLSLESNIASEAKMATILRRLEALEVKERA--PAQINHISAPGC 268

Query: 361 VLCDSLDHVIDNCP 402
             C S  HV + CP
Sbjct: 269 HNCQSPTHVSEECP 282


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/134 (46%), Positives = 90/134 (67%)
 Frame = +1

Query: 1   LQCPNHGLEKGRLIQILYEGLDFNSKAMIETMSTGDFCDKTVDEAWSFLEDIAEKVQQWE 180
           +QCP+HGLEK RL Q++YEGLD++SK  +E+M  GDF  K  DEAW FLE ++EK  QWE
Sbjct: 84  IQCPHHGLEKWRLCQVIYEGLDYSSKTSLESMCQGDFMRKNADEAWEFLESLSEKTMQWE 143

Query: 181 TSREPKKVASSTTKNVVFHVDKEFDANAKMAALTRRVEALELEKEAKPPAQVNNVESPGC 360
              + +  + S +K+    ++    + AKMA + RR+EALE+++ A  PAQ+N++ +PGC
Sbjct: 144 NC-DDRVSSVSQSKSSGLSLESNIASEAKMATILRRLEALEVKERA--PAQINHISAPGC 200

Query: 361 VLCDSLDHVIDNCP 402
             C S  HV + CP
Sbjct: 201 HNCQSPTHVSEECP 214


>gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 279

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/125 (44%), Positives = 81/125 (64%)
 Frame = +1

Query: 1   LQCPNHGLEKGRLIQILYEGLDFNSKAMIETMSTGDFCDKTVDEAWSFLEDIAEKVQQWE 180
           +QCP+HGLEK RL QI+YEGLD+++K  +E+M  GDF  K  DEAW FLE ++EK+ QWE
Sbjct: 154 IQCPHHGLEKWRLCQIIYEGLDYSAKTSLESMCHGDFMRKNADEAWEFLESLSEKIMQWE 213

Query: 181 TSREPKKVASSTTKNVVFHVDKEFDANAKMAALTRRVEALELEKEAKPPAQVNNVESPGC 360
              +    +   +K+    ++    + AKMA + RR+EALE+++ A   AQ+N+V +  C
Sbjct: 214 HC-DDMVSSIPQSKSSGLSLESNIASEAKMATILRRLEALEIKERAL--AQINHVSASRC 270

Query: 361 VLCDS 375
             C S
Sbjct: 271 HNCQS 275


>emb|CAN76371.1| hypothetical protein VITISV_011467 [Vitis vinifera]
          Length = 1595

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 6/142 (4%)
 Frame = +1

Query: 7   CPNHGLEKGRLIQILYEGLDFNSKAMIETMSTGDFCDKTVDEAWSFLEDIAEKVQQWE-- 180
           CP+HG +   L+   YEG+  + K ++ETM  GDF  K ++EA  FL  +AE  + W+  
Sbjct: 265 CPHHGFDTWLLVSYFYEGMSSSMKQILETMCGGDFMSKNLEEAMDFLSYVAEVSRGWDEP 324

Query: 181 TSREPKKVASSTTKNV---VFHVDKEFDANAKMAALTRRVEALELEKEAKPPA-QVNNVE 348
            SRE  K  S  T+N    ++ + ++ D  AK+A L RR+E LEL+K  +  A     V 
Sbjct: 325 NSREKGKFPSQQTQNPKAGMYMLSEDVDMKAKVATLARRLEELELKKMHEVQAISDTQVH 384

Query: 349 SPGCVLCDSLDHVIDNCPGVTA 414
              C +C S DHV+D CP + A
Sbjct: 385 VMPCTICQSCDHVVDECPTMPA 406


>emb|CAN78930.1| hypothetical protein VITISV_008432 [Vitis vinifera]
          Length = 1488

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
 Frame = +1

Query: 7   CPNHGLEKGRLIQILYEGLDFNSKAMIETMSTGDFCDKTVDEAWSFLEDIAEKVQQWE-- 180
           CP+HG +   L+   Y+G+  + K ++ETM  GDF  K  DEA  FL  +AE  + W+  
Sbjct: 235 CPHHGFDTWLLVSYFYDGMSSSMKQILETMCGGDFMSKNPDEAMDFLSYVAEVSRGWDEP 294

Query: 181 TSREPKKVASSTTKNV---VFHVDKEFDANAKMAALTRRVEALELEK--EAKPPAQVNNV 345
            SRE  K  S  T+N    ++ + ++ D  AK+A L RR+E LEL+K  E +  ++    
Sbjct: 295 NSREKGKFPSQQTQNPKAGMYMLSEDVDMKAKVATLARRLEELELKKMHEVQAISETQTH 354

Query: 346 ESPGCVLCDSLDHVIDNCPGVTA 414
             P C +C S DHV+D CP + A
Sbjct: 355 AMP-CTICQSCDHVVDECPTMPA 376