BLASTX nr result

ID: Coptis21_contig00032499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032499
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878303.1| dihydrodipicolinate reductase family protein...    50   6e-06
ref|NP_567088.1| dihydrodipicolinate reductase 2 [Arabidopsis th...    50   6e-06
ref|NP_974464.1| dihydrodipicolinate reductase 2 [Arabidopsis th...    50   6e-06
ref|XP_002331604.1| predicted protein [Populus trichocarpa] gi|2...    49   6e-06

>ref|XP_002878303.1| dihydrodipicolinate reductase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324141|gb|EFH54562.1|
           dihydrodipicolinate reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 349

 Score = 50.1 bits (118), Expect(2) = 6e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -1

Query: 201 FVLQHNVLGRSDYAEGTIDAAIFLAKKVRTK 109
           F  QHNV GRS YAEGT+DA +FLAKK+R+K
Sbjct: 301 FEFQHNVCGRSIYAEGTVDAVLFLAKKIRSK 331



 Score = 24.6 bits (52), Expect(2) = 6e-06
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 109 DKRTYNMFDVFLGGNM 62
           +KR YNM DV   GNM
Sbjct: 333 EKRIYNMIDVLREGNM 348


>ref|NP_567088.1| dihydrodipicolinate reductase 2 [Arabidopsis thaliana]
           gi|75245889|sp|Q8LB01.1|DAPB2_ARATH RecName:
           Full=4-hydroxy-tetrahydrodipicolinate reductase 2,
           chloroplastic; Short=HTPA reductase 2; Flags: Precursor
           gi|21593099|gb|AAM65048.1| unknown [Arabidopsis
           thaliana] gi|111074490|gb|ABH04618.1| At3g59890
           [Arabidopsis thaliana] gi|332646461|gb|AEE79982.1|
           dihydrodipicolinate reductase 2 [Arabidopsis thaliana]
          Length = 349

 Score = 50.1 bits (118), Expect(2) = 6e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -1

Query: 201 FVLQHNVLGRSDYAEGTIDAAIFLAKKVRTK 109
           F  QHNV GRS YAEGT+DA +FLAKK+R+K
Sbjct: 301 FEFQHNVCGRSIYAEGTVDAVLFLAKKIRSK 331



 Score = 24.6 bits (52), Expect(2) = 6e-06
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 109 DKRTYNMFDVFLGGNM 62
           +KR YNM DV   GNM
Sbjct: 333 EKRIYNMIDVLREGNM 348


>ref|NP_974464.1| dihydrodipicolinate reductase 2 [Arabidopsis thaliana]
           gi|332646460|gb|AEE79981.1| dihydrodipicolinate
           reductase 2 [Arabidopsis thaliana]
          Length = 343

 Score = 50.1 bits (118), Expect(2) = 6e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -1

Query: 201 FVLQHNVLGRSDYAEGTIDAAIFLAKKVRTK 109
           F  QHNV GRS YAEGT+DA +FLAKK+R+K
Sbjct: 295 FEFQHNVCGRSIYAEGTVDAVLFLAKKIRSK 325



 Score = 24.6 bits (52), Expect(2) = 6e-06
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 109 DKRTYNMFDVFLGGNM 62
           +KR YNM DV   GNM
Sbjct: 327 EKRIYNMIDVLREGNM 342


>ref|XP_002331604.1| predicted protein [Populus trichocarpa] gi|222874000|gb|EEF11131.1|
           predicted protein [Populus trichocarpa]
          Length = 283

 Score = 48.5 bits (114), Expect(2) = 6e-06
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = -1

Query: 201 FVLQHNVLGRSDYAEGTIDAAIFLAKKVRTK 109
           F  QHNV GRS YAEGT+DA +FLAKK+++K
Sbjct: 235 FEFQHNVCGRSIYAEGTVDAVLFLAKKIQSK 265



 Score = 26.2 bits (56), Expect(2) = 6e-06
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -3

Query: 109 DKRTYNMFDVFLGGNM 62
           DKR YNM DV   GNM
Sbjct: 267 DKRIYNMIDVLREGNM 282


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