BLASTX nr result

ID: Coptis21_contig00032489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032489
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608310.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   100   2e-19
ref|XP_003545772.1| PREDICTED: basic form of pathogenesis-relate...    97   1e-18
gb|AFK36478.1| unknown [Lotus japonicus]                               96   3e-18
emb|CAP66260.1| pathogenesis-related protein 1a [Beta vulgaris]        96   3e-18
dbj|BAB78476.1| PR-1 [Solanum torvum]                                  95   7e-18

>ref|XP_003608310.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355509365|gb|AES90507.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 908

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 40/68 (58%), Positives = 54/68 (79%)
 Frame = +1

Query: 10  WVDEEIDYYDYNANTCIDGKDCLHYTQIIWKNTVQVGCGMAQCTNVANKVFISCNYYPPG 189
           WV+E+  YYDYN N+CI+G  CLHYTQ++W+N+V++GC   QCTN     F++CNY PPG
Sbjct: 100 WVNEK-QYYDYNTNSCINGGQCLHYTQVVWRNSVRLGCARVQCTN--GWWFVTCNYDPPG 156

Query: 190 NFVGQRPY 213
           N+VGQ+PY
Sbjct: 157 NYVGQKPY 164


>ref|XP_003545772.1| PREDICTED: basic form of pathogenesis-related protein 1-like
           [Glycine max]
          Length = 165

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 41/71 (57%), Positives = 55/71 (77%)
 Frame = +1

Query: 1   MRCWVDEEIDYYDYNANTCIDGKDCLHYTQIIWKNTVQVGCGMAQCTNVANKVFISCNYY 180
           ++ WVDE+   YDYN+NTC+ G +C HYTQ++WKN+V++GCG  +C N     FI+CNY 
Sbjct: 99  VKLWVDEK-SKYDYNSNTCVGG-ECRHYTQVVWKNSVRLGCGKVRCDN--GGTFITCNYA 154

Query: 181 PPGNFVGQRPY 213
           PPGN+VGQRPY
Sbjct: 155 PPGNYVGQRPY 165


>gb|AFK36478.1| unknown [Lotus japonicus]
          Length = 164

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 38/71 (53%), Positives = 54/71 (76%)
 Frame = +1

Query: 1   MRCWVDEEIDYYDYNANTCIDGKDCLHYTQIIWKNTVQVGCGMAQCTNVANKVFISCNYY 180
           ++ WVDE+ +Y DYN+N+C  GK C HYTQ++WKN++++GC   +C N     FI+CNY 
Sbjct: 96  VKLWVDEKANY-DYNSNSCASGKQCGHYTQVVWKNSMRLGCAKVKCDN-GGGTFITCNYD 153

Query: 181 PPGNFVGQRPY 213
           PPGN+VGQ+PY
Sbjct: 154 PPGNYVGQKPY 164


>emb|CAP66260.1| pathogenesis-related protein 1a [Beta vulgaris]
          Length = 168

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 39/71 (54%), Positives = 54/71 (76%)
 Frame = +1

Query: 1   MRCWVDEEIDYYDYNANTCIDGKDCLHYTQIIWKNTVQVGCGMAQCTNVANKVFISCNYY 180
           ++ WV E+ DY DYN+NTC  GK C HYTQ++W+++V++GC   QC N    +F++CNY 
Sbjct: 101 VQMWVAEKADY-DYNSNTCASGKVCGHYTQVVWRDSVRLGCARVQCDN--GGIFVTCNYD 157

Query: 181 PPGNFVGQRPY 213
           PPGNFVGQ+PY
Sbjct: 158 PPGNFVGQKPY 168


>dbj|BAB78476.1| PR-1 [Solanum torvum]
          Length = 168

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 38/71 (53%), Positives = 55/71 (77%)
 Frame = +1

Query: 1   MRCWVDEEIDYYDYNANTCIDGKDCLHYTQIIWKNTVQVGCGMAQCTNVANKVFISCNYY 180
           ++ W DE+  +YDYN+NTC  GK C HYTQ++W+N+V++GC   +C+  +  VFI+CNY 
Sbjct: 85  VKMWEDEK-QWYDYNSNTCAPGKVCGHYTQVVWRNSVRLGCARVRCS--SGWVFITCNYD 141

Query: 181 PPGNFVGQRPY 213
           PPGN++GQRPY
Sbjct: 142 PPGNYIGQRPY 152


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