BLASTX nr result

ID: Coptis21_contig00032471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032471
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525924.1| conserved hypothetical protein [Ricinus comm...   129   2e-28
ref|XP_002331254.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002330925.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_004154727.1| PREDICTED: uncharacterized protein LOC101226...   118   4e-25
ref|XP_004137141.1| PREDICTED: uncharacterized protein LOC101208...   117   1e-24

>ref|XP_002525924.1| conserved hypothetical protein [Ricinus communis]
           gi|223534753|gb|EEF36444.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 809

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/105 (64%), Positives = 87/105 (82%), Gaps = 5/105 (4%)
 Frame = +3

Query: 126 TSNSSIAQPEAILEWLQKEMGYRPQVQFSSTSSNKTTLPSIETLRKICRGNMVPIWSFLL 305
           +++S ++QPEAILEWLQKEMGYRP   +++ S+NK+ LPSI+ +RKICRGNM+PIWSFL+
Sbjct: 4   STSSVVSQPEAILEWLQKEMGYRPLGPYNA-STNKSQLPSIDAIRKICRGNMIPIWSFLI 62

Query: 306 QRVKSEKTVEKIRRNILVHGSSNN-ETENVV---KNDEGGR-KGG 425
           +RVKSEKTVE IR+NILVHGSS   E+ N+V   K + GGR KGG
Sbjct: 63  KRVKSEKTVESIRKNILVHGSSGGVESGNLVNLGKEEGGGRIKGG 107


>ref|XP_002331254.1| predicted protein [Populus trichocarpa] gi|222873679|gb|EEF10810.1|
           predicted protein [Populus trichocarpa]
          Length = 797

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/99 (65%), Positives = 78/99 (78%)
 Frame = +3

Query: 129 SNSSIAQPEAILEWLQKEMGYRPQVQFSSTSSNKTTLPSIETLRKICRGNMVPIWSFLLQ 308
           S+S++AQPEAILEWLQKEMGYRP   +S+T+S K+ LPSI+ +RKICRGNM+PIW FL++
Sbjct: 4   SSSAVAQPEAILEWLQKEMGYRPLGPYSATTS-KSQLPSIDAMRKICRGNMIPIWGFLVK 62

Query: 309 RVKSEKTVEKIRRNILVHGSSNNETENVVKNDEGGRKGG 425
           RVKSEKTVE IR+NILVHGS           DEG  KGG
Sbjct: 63  RVKSEKTVENIRKNILVHGSGGGLVN--AGKDEGRSKGG 99


>ref|XP_002330925.1| predicted protein [Populus trichocarpa] gi|222873119|gb|EEF10250.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/101 (62%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
 Frame = +3

Query: 129 SNSSIAQPEAILEWLQKEMGYRPQVQFSSTSSNKTTLPSIETLRKICRGNMVPIWSFLLQ 308
           S+S++AQPEAILEWL KEMGYRP +   S +++K+ LPSI+ +RKICRGNM+PIW FL++
Sbjct: 4   SSSAVAQPEAILEWLHKEMGYRP-LGPQSAATSKSQLPSIDAIRKICRGNMIPIWGFLIK 62

Query: 309 RVKSEKTVEKIRRNILVHGSSNNETENVVK--NDEGGRKGG 425
           RVKSEKTVE IR+NILVHG    E+  +V    DEG  KGG
Sbjct: 63  RVKSEKTVENIRKNILVHGGGGGESGGLVNVGKDEGRSKGG 103


>ref|XP_004154727.1| PREDICTED: uncharacterized protein LOC101226721 [Cucumis sativus]
          Length = 800

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/87 (63%), Positives = 71/87 (81%)
 Frame = +3

Query: 129 SNSSIAQPEAILEWLQKEMGYRPQVQFSSTSSNKTTLPSIETLRKICRGNMVPIWSFLLQ 308
           S+SS+AQPEAIL+WLQKEMGYRP   +S++S  K+ LPS++  RK+CRGNM+PIW+FL+ 
Sbjct: 4   SSSSMAQPEAILDWLQKEMGYRPLGSYSASS--KSQLPSVDAFRKVCRGNMIPIWNFLIT 61

Query: 309 RVKSEKTVEKIRRNILVHGSSNNETEN 389
           RVKSEKTV+ IRRNI+VHG      E+
Sbjct: 62  RVKSEKTVDNIRRNIMVHGGGGGAGES 88


>ref|XP_004137141.1| PREDICTED: uncharacterized protein LOC101208689 [Cucumis sativus]
          Length = 800

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/87 (62%), Positives = 70/87 (80%)
 Frame = +3

Query: 129 SNSSIAQPEAILEWLQKEMGYRPQVQFSSTSSNKTTLPSIETLRKICRGNMVPIWSFLLQ 308
           S+SS+AQPEAIL+WLQKEMGYRP   +S++S  K+ LPS++  RK+CRGNM+PIW+F + 
Sbjct: 4   SSSSMAQPEAILDWLQKEMGYRPLGSYSASS--KSQLPSVDAFRKVCRGNMIPIWNFFIT 61

Query: 309 RVKSEKTVEKIRRNILVHGSSNNETEN 389
           RVKSEKTV+ IRRNI+VHG      E+
Sbjct: 62  RVKSEKTVDNIRRNIMVHGGGGGAGES 88


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