BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032428
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    85   7e-15
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09

>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/68 (61%), Positives = 51/68 (75%)
 Frame = -1

Query: 211 ALDFFNWVSVKNGFKPSLTVYSLMLRILGCKETMKEFWRLLKRMKDEGCDIDEETYTTIL 32
           A DFFNWV  +NGFKPS  +YSLMLRIL  K++MK FW  L++MK++G   DEETY TIL
Sbjct: 109 AWDFFNWVCDRNGFKPSSPLYSLMLRILVKKDSMKNFWITLRKMKEQGFYTDEETYLTIL 168

Query: 31  IHFRCEKM 8
             FR E+M
Sbjct: 169 GVFRKERM 176


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/65 (56%), Positives = 48/65 (73%)
 Frame = -1

Query: 202 FFNWVSVKNGFKPSLTVYSLMLRILGCKETMKEFWRLLKRMKDEGCDIDEETYTTILIHF 23
           FFNWV  K  F+PS +VYSL++RIL  K+TMK+FW  L+ MK+ G  +DEETY TI + F
Sbjct: 113 FFNWVCKKVWFRPSCSVYSLIVRILAAKDTMKQFWVTLRMMKENGFFLDEETYLTISVGF 172

Query: 22  RCEKM 8
           + EKM
Sbjct: 173 KREKM 177


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/66 (54%), Positives = 50/66 (75%)
 Frame = -1

Query: 205 DFFNWVSVKNGFKPSLTVYSLMLRILGCKETMKEFWRLLKRMKDEGCDIDEETYTTILIH 26
           +FFNWV+ KNGF+PS  +YSL+LR L   E+MK+FW  +++MK++G  ID+ETY TIL  
Sbjct: 113 NFFNWVTEKNGFRPSSAMYSLILRSLVHGESMKQFWVTIRKMKEQGFCIDKETYLTILGV 172

Query: 25  FRCEKM 8
           F+  KM
Sbjct: 173 FKKGKM 178



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/68 (36%), Positives = 42/68 (61%)
 Frame = -1

Query: 211 ALDFFNWVSVKNGFKPSLTVYSLMLRILGCKETMKEFWRLLKRMKDEGCDIDEETYTTIL 32
           AL FF WV    G++ S   Y+++ R+LG  +++ EFW +++ MK +G ++D +TY  I 
Sbjct: 248 ALRFFQWVGECPGYEHSSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKIS 307

Query: 31  IHFRCEKM 8
             F+  KM
Sbjct: 308 RQFQKNKM 315


>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/65 (47%), Positives = 43/65 (66%)
 Frame = -1

Query: 202 FFNWVSVKNGFKPSLTVYSLMLRILGCKETMKEFWRLLKRMKDEGCDIDEETYTTILIHF 23
           FFNWVS K  ++PS ++Y L+LR+L  +ET+K FW  L+ MK +G   DEE Y  IL  F
Sbjct: 117 FFNWVSAKEWYRPSSSLYGLILRVLATEETIKLFWITLRTMKTKGFYFDEEMYFPILAGF 176

Query: 22  RCEKM 8
           + + M
Sbjct: 177 KRKNM 181


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = -1

Query: 211 ALDFFNWVSVKNGFKPSLTVYSLMLRILGCKETMKEFWRLLKRMKDEGCDIDEETYTTIL 32
           A +FFNW S KNG   S ++YS++LRI    E+MK FW  L+ MK+ G  +DEETY TIL
Sbjct: 104 ASEFFNWASGKNGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTIL 163