BLASTX nr result

ID: Coptis21_contig00032416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032416
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17583.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002269408.1| PREDICTED: wall-associated receptor kinase-l...   122   4e-26
ref|XP_002327712.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_002310777.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|XP_003517256.1| PREDICTED: probable receptor-like protein ki...   108   4e-22

>emb|CBI17583.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/138 (45%), Positives = 86/138 (62%)
 Frame = -1

Query: 417 NQNSVSTGNLFAGSRITVPLRCACPTKSQFDGGVNYLLSYLIVTGDFVSSISTRFGVNTG 238
           +Q +  T N++ G+++TVPLRCACPTK+Q D GV YL+SYL+ +GD+VSSIS RFGV+TG
Sbjct: 168 SQRTSLTTNIYTGTKLTVPLRCACPTKNQSDVGVKYLMSYLVASGDYVSSISVRFGVDTG 227

Query: 237 STLNANGLSMEDATIYPYTTLLVPLQXXXXXXXXXXXXXXXXXXXXXXXSGKHKSWLYAV 58
            TL AN LS ++  IYP+TTLL+PLQ                           K+W+Y V
Sbjct: 228 MTLEANELSEQNPNIYPFTTLLIPLQNLPSSSQTI------------------KTWVYVV 269

Query: 57  IGAVSAGSLVSIVSIVTF 4
           +G V+  +LV +   V F
Sbjct: 270 VGVVAGSALVLLFGSVIF 287



 Score =  108 bits (271), Expect = 3e-22
 Identities = 65/139 (46%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
 Frame = -1

Query: 417  NQN-SVSTGNLFAGSRITVPLRCACPTKSQFDGGVNYLLSYLIVTGDFVSSISTRFGVNT 241
            NQN SVS  NL  G+ ITVPLRCACPTK+Q D GV YL+SYL+  GD VS+IS RFGV+T
Sbjct: 813  NQNPSVSATNLNPGTSITVPLRCACPTKAQSDAGVKYLMSYLVAYGDTVSAISGRFGVDT 872

Query: 240  GSTLNANGLSMEDATIYPYTTLLVPLQXXXXXXXXXXXXXXXXXXXXXXXSGKHKSWLYA 61
              TL AN LS +D TI P+TTLL+PLQ                           K+W+Y 
Sbjct: 873  ERTLEANELSEQD-TINPFTTLLIPLQNPPSSSQTI------------------KTWVYV 913

Query: 60   VIGAVSAGSLVSIVSIVTF 4
            ++G  +   L+     V F
Sbjct: 914  IVGVAAGVVLLLFFGYVIF 932


>ref|XP_002269408.1| PREDICTED: wall-associated receptor kinase-like 4-like [Vitis
           vinifera]
          Length = 638

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/144 (43%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
 Frame = -1

Query: 417 NQNSVSTGNLFAGSRITVPLRCACPTKSQFDGGVNYLLSYLIVTGDFVSSISTRFGVNTG 238
           +Q +  T N++ G+++TVPLRCACPTK+Q D GV YL+SYL+ +GD+VSSIS RFGV+TG
Sbjct: 148 SQRTSLTTNIYTGTKLTVPLRCACPTKNQSDVGVKYLMSYLVASGDYVSSISVRFGVDTG 207

Query: 237 STLNANGLSMEDATIYPYTTLLVPLQ------XXXXXXXXXXXXXXXXXXXXXXXSGKHK 76
            TL AN LS ++  IYP+TTLL+PLQ                                 K
Sbjct: 208 MTLEANELSEQNPNIYPFTTLLIPLQNLPSSSQTIVPPPPPPPSPPPPTAVSSPSKSLKK 267

Query: 75  SWLYAVIGAVSAGSLVSIVSIVTF 4
           +W+Y V+G V+  +LV +   V F
Sbjct: 268 TWVYVVVGVVAGSALVLLFGSVIF 291


>ref|XP_002327712.1| predicted protein [Populus trichocarpa] gi|222836797|gb|EEE75190.1|
           predicted protein [Populus trichocarpa]
          Length = 630

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/143 (41%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
 Frame = -1

Query: 417 NQNSVSTGNLFAGSRITVPLRCACPTKSQFDGGVNYLLSYLIVTGDFVSSISTRFGVNTG 238
           NQ +  T ++ +G  +TVPLRCACPTK+Q D G+ YLLSYL+  GD V +IS +FG  TG
Sbjct: 136 NQKTTRTDDILSGETLTVPLRCACPTKNQSDLGIRYLLSYLVTPGDDVPAISEQFGAATG 195

Query: 237 STLNANGLSMEDATIYPYTTLLVPLQXXXXXXXXXXXXXXXXXXXXXXXS-----GKHKS 73
            TL ANGL  ++ TI+P+TTLL+PLQ                       S        K+
Sbjct: 196 RTLEANGLPEQNPTIFPFTTLLIPLQSTPTSSQTVVPPPPPASSSPPSPSPNPEKSSKKT 255

Query: 72  WLYAVIGAVSAGSLVSIVSIVTF 4
           WLY V+G V   +L  ++  + F
Sbjct: 256 WLYVVVGVVGGIALTIVIGTIIF 278


>ref|XP_002310777.1| predicted protein [Populus trichocarpa] gi|222853680|gb|EEE91227.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  108 bits (270), Expect = 4e-22
 Identities = 57/145 (39%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
 Frame = -1

Query: 417 NQNSVSTGNLFAGSRITVPLRCACPTKSQFDGGVNYLLSYLIVTGDFVSSISTRFGVNTG 238
           N+    T N+FAG  +TVPLRCACPTK+Q D G+ YLLSYL+  GD VS    RFG + G
Sbjct: 147 NEKGTRTVNIFAGETLTVPLRCACPTKNQSDLGIRYLLSYLVTWGDTVSIAGVRFGADIG 206

Query: 237 STLNANGLSMEDATIYPYTTLLVPL-------QXXXXXXXXXXXXXXXXXXXXXXXSGKH 79
             L AN +S ++ TIYP+TTLL+PL       Q                          +
Sbjct: 207 RALEANEISEKNPTIYPFTTLLIPLKNPPTSSQTVVPPPPPASPSPSPPSPSPNSDKSAN 266

Query: 78  KSWLYAVIGAVSAGSLVSIVSIVTF 4
           K+W+Y  +GAV    L  ++  + F
Sbjct: 267 KTWIYVFVGAVGGIVLTLVIGTIIF 291


>ref|XP_003517256.1| PREDICTED: probable receptor-like protein kinase At1g49730-like
           [Glycine max] gi|148362072|gb|ABQ59612.1| LYK4 [Glycine
           max]
          Length = 633

 Score =  108 bits (270), Expect = 4e-22
 Identities = 61/140 (43%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
 Frame = -1

Query: 417 NQNSVSTGNLFAGSRITVPLRCACPTKSQFDGGVNYLLSYLIVTGDFVSSISTRFGVNTG 238
           NQN  +  N++ G R+ VPLRCACPTK+Q + G+ YLLSYL+  GD VS IS +FGVN  
Sbjct: 150 NQNH-NPANIYPGRRLLVPLRCACPTKNQTEKGIRYLLSYLVNWGDSVSFISEKFGVNFM 208

Query: 237 STLNANGLSMEDATIYPYTTLLVPL-QXXXXXXXXXXXXXXXXXXXXXXXSGKHKSWLYA 61
           +TL AN L++  ATIYP+TT+LVPL                            +K+W+Y 
Sbjct: 209 TTLEANTLTLTQATIYPFTTILVPLHDKPSSSQTVSPTRRTPPPSPPSSDHSSNKTWVYV 268

Query: 60  VIG-AVSAGSLVSIVSIVTF 4
           V+G  V A +L+S++  V F
Sbjct: 269 VVGVVVGAIALISVLCAVIF 288


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