BLASTX nr result

ID: Coptis21_contig00032409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032409
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519921.1| nucleic acid binding protein, putative [Rici...   109   2e-22
ref|XP_004145573.1| PREDICTED: alkylated DNA repair protein alkB...   109   3e-22
emb|CBI29214.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB...   107   8e-22
emb|CAN76404.1| hypothetical protein VITISV_021238 [Vitis vinifera]   107   8e-22

>ref|XP_002519921.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540967|gb|EEF42525.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 421

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/86 (62%), Positives = 65/86 (75%)
 Frame = +3

Query: 3   EEEENEDIYVANCGPAVGISLEEIASAFSEFGQVKSVEAADETGARVIVSFFQGSSARAA 182
           +E  N ++YVANCGPAVGIS E I S FS FG+VK V AADE+GARVIVS+F+ SSA++A
Sbjct: 51  DEHLNPNLYVANCGPAVGISYEMIESVFSSFGEVKGVYAADESGARVIVSYFEVSSAQSA 110

Query: 183 LQSLHGLPCPLLNNRLLHIRYSFLKP 260
             SL G PCP    R LHIR+S L+P
Sbjct: 111 FNSLSGKPCPRFGGRYLHIRFSVLQP 136


>ref|XP_004145573.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like
           [Cucumis sativus] gi|449523025|ref|XP_004168525.1|
           PREDICTED: alkylated DNA repair protein alkB homolog
           8-like [Cucumis sativus]
          Length = 344

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/79 (67%), Positives = 61/79 (77%)
 Frame = +3

Query: 24  IYVANCGPAVGISLEEIASAFSEFGQVKSVEAADETGARVIVSFFQGSSARAALQSLHGL 203
           +YVANCGPAVGIS   IA+ F+ FG VK V  AD+TGARVIV F + SSARAAL++LHG 
Sbjct: 23  LYVANCGPAVGISHPAIAAVFAHFGHVKGVHPADDTGARVIVCFSEESSARAALEALHGR 82

Query: 204 PCPLLNNRLLHIRYSFLKP 260
           PCPLL  R LHIRYS  +P
Sbjct: 83  PCPLLGGRTLHIRYSITRP 101


>emb|CBI29214.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/84 (60%), Positives = 66/84 (78%)
 Frame = +3

Query: 9   EENEDIYVANCGPAVGISLEEIASAFSEFGQVKSVEAADETGARVIVSFFQGSSARAALQ 188
           E + ++YVANCGPAVG+S + IAS FS FG+VK V  AD++GARVIVS+F+ S+A+AAL+
Sbjct: 587 ELSPNLYVANCGPAVGLSFDTIASVFSTFGEVKGVYPADDSGARVIVSYFEESAAQAALK 646

Query: 189 SLHGLPCPLLNNRLLHIRYSFLKP 260
           +L G PCP L  R LHIRYS  +P
Sbjct: 647 ALDGHPCPALGGRFLHIRYSIFQP 670


>ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Vitis
           vinifera]
          Length = 349

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/84 (60%), Positives = 66/84 (78%)
 Frame = +3

Query: 9   EENEDIYVANCGPAVGISLEEIASAFSEFGQVKSVEAADETGARVIVSFFQGSSARAALQ 188
           E + ++YVANCGPAVG+S + IAS FS FG+VK V  AD++GARVIVS+F+ S+A+AAL+
Sbjct: 24  ELSPNLYVANCGPAVGLSFDTIASVFSTFGEVKGVYPADDSGARVIVSYFEESAAQAALK 83

Query: 189 SLHGLPCPLLNNRLLHIRYSFLKP 260
           +L G PCP L  R LHIRYS  +P
Sbjct: 84  ALDGHPCPALGGRFLHIRYSIFQP 107


>emb|CAN76404.1| hypothetical protein VITISV_021238 [Vitis vinifera]
          Length = 1036

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/84 (60%), Positives = 66/84 (78%)
 Frame = +3

Query: 9   EENEDIYVANCGPAVGISLEEIASAFSEFGQVKSVEAADETGARVIVSFFQGSSARAALQ 188
           E + ++YVANCGPAVG+S + IAS FS FG+VK V  AD++GARVIVS+F+ S+A+AAL+
Sbjct: 672 ELSPNLYVANCGPAVGLSFDTIASVFSTFGEVKGVYPADDSGARVIVSYFEESAAQAALK 731

Query: 189 SLHGLPCPLLNNRLLHIRYSFLKP 260
           +L G PCP L  R LHIRYS  +P
Sbjct: 732 ALDGHPCPALGGRFLHIRYSIFQP 755


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