BLASTX nr result

ID: Coptis21_contig00032395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032395
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319707.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
emb|CAN72283.1| hypothetical protein VITISV_012897 [Vitis vinifera]   116   2e-24
ref|XP_003634959.1| PREDICTED: uncharacterized protein LOC100852...   115   4e-24
emb|CAN80941.1| hypothetical protein VITISV_035838 [Vitis vinifera]   114   1e-23
ref|XP_003631393.1| PREDICTED: blue copper protein-like [Vitis v...   112   3e-23

>ref|XP_002319707.1| predicted protein [Populus trichocarpa] gi|222858083|gb|EEE95630.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  116 bits (291), Expect = 2e-24
 Identities = 50/83 (60%), Positives = 65/83 (78%)
 Frame = -3

Query: 249 LITLAVVAIVLPTVALATEFVVGDAAGWTKGFDYAAWANGKDFRVGDKLVFNYPVGAHSV 70
           L    ++A ++P   LATE++VGD +GWT GF+Y AWA GK+F VGD+LVF YPVGAH+V
Sbjct: 2   LAIFVLIAAIVPMTTLATEYIVGDESGWTLGFEYHAWAAGKNFLVGDELVFKYPVGAHNV 61

Query: 69  FKVNGTSFKDCVIPPVNEALISG 1
           FKVNGT F++C+IPP + AL SG
Sbjct: 62  FKVNGTEFQNCIIPPADRALTSG 84


>emb|CAN72283.1| hypothetical protein VITISV_012897 [Vitis vinifera]
          Length = 172

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/83 (66%), Positives = 61/83 (73%)
 Frame = -3

Query: 249 LITLAVVAIVLPTVALATEFVVGDAAGWTKGFDYAAWANGKDFRVGDKLVFNYPVGAHSV 70
           L  LA+ AIVLP VA+ATEF VGD  GWT  FDY AWA  K F VGDKLVF Y  G H+V
Sbjct: 6   LAALAIFAIVLPXVAMATEFTVGDDQGWTINFDYEAWAKDKVFHVGDKLVFKYTAGRHNV 65

Query: 69  FKVNGTSFKDCVIPPVNEALISG 1
           FKVNGT+F +C IPP NEAL +G
Sbjct: 66  FKVNGTAFTNCTIPPANEALTTG 88


>ref|XP_003634959.1| PREDICTED: uncharacterized protein LOC100852510 [Vitis vinifera]
          Length = 313

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/80 (66%), Positives = 61/80 (76%)
 Frame = -3

Query: 240 LAVVAIVLPTVALATEFVVGDAAGWTKGFDYAAWANGKDFRVGDKLVFNYPVGAHSVFKV 61
           LA++AI+LP VA+ATEF VGD  GWT  FDY AWA  K F VGDKLVF Y  G H+VFKV
Sbjct: 132 LAILAILLPAVAMATEFTVGDDQGWTINFDYEAWAKDKVFHVGDKLVFKYTAGRHNVFKV 191

Query: 60  NGTSFKDCVIPPVNEALISG 1
           NGT+F +C IPP NEAL +G
Sbjct: 192 NGTAFTNCAIPPANEALTTG 211



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/68 (58%), Positives = 46/68 (67%)
 Frame = -3

Query: 204 LATEFVVGDAAGWTKGFDYAAWANGKDFRVGDKLVFNYPVGAHSVFKVNGTSFKDCVIPP 25
           +ATEF VGD   WT  FDY AWA  K F VGDKLVF Y    H+VFKVNGT+F +C IP 
Sbjct: 1   MATEFTVGDDQRWTINFDYEAWAKEKIFHVGDKLVFKYIARWHNVFKVNGTTFTNCTIPQ 60

Query: 24  VNEALISG 1
            NE + +G
Sbjct: 61  ENEPITTG 68


>emb|CAN80941.1| hypothetical protein VITISV_035838 [Vitis vinifera]
          Length = 167

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/86 (61%), Positives = 63/86 (73%)
 Frame = -3

Query: 258 KQFLITLAVVAIVLPTVALATEFVVGDAAGWTKGFDYAAWANGKDFRVGDKLVFNYPVGA 79
           K F+  +A++A VL  VA+ATEF VGD  GWT  FDY AWA  K F VGD+LVFNY  G 
Sbjct: 4   KWFVSAIAILAFVLAAVAMATEFAVGDDQGWTINFDYEAWAKDKVFHVGDELVFNYTAGR 63

Query: 78  HSVFKVNGTSFKDCVIPPVNEALISG 1
           H+VFKVNGT+F +C IPP NEAL +G
Sbjct: 64  HNVFKVNGTAFTNCTIPPSNEALSTG 89


>ref|XP_003631393.1| PREDICTED: blue copper protein-like [Vitis vinifera]
          Length = 154

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/90 (58%), Positives = 68/90 (75%)
 Frame = -3

Query: 270 MSSYKQFLITLAVVAIVLPTVALATEFVVGDAAGWTKGFDYAAWANGKDFRVGDKLVFNY 91
           M+S K F+I +A+  + LP++ L  EF+VGD+ GWT  FDY AWA  K F+VGDKLVFNY
Sbjct: 1   MASTKAFII-IAMATVFLPSI-LGKEFIVGDSTGWTTNFDYQAWAQDKHFQVGDKLVFNY 58

Query: 90  PVGAHSVFKVNGTSFKDCVIPPVNEALISG 1
             GAH+VF+VNGT+F+ C IPP NEAL +G
Sbjct: 59  KKGAHNVFEVNGTAFQQCSIPPANEALTTG 88


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