BLASTX nr result

ID: Coptis21_contig00032390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032390
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002489145.1| hypothetical protein SORBIDRAFT_0019s004400 ...   385   e-105
ref|XP_002273675.1| PREDICTED: DNA replication licensing factor ...   385   e-105
emb|CAN78904.1| hypothetical protein VITISV_022714 [Vitis vinifera]   385   e-105
ref|XP_004137663.1| PREDICTED: DNA replication licensing factor ...   384   e-105
gb|AFW60764.1| hypothetical protein ZEAMMB73_559613 [Zea mays]        384   e-105

>ref|XP_002489145.1| hypothetical protein SORBIDRAFT_0019s004400 [Sorghum bicolor]
           gi|241947244|gb|EES20389.1| hypothetical protein
           SORBIDRAFT_0019s004400 [Sorghum bicolor]
          Length = 955

 Score =  385 bits (989), Expect = e-105
 Identities = 187/195 (95%), Positives = 191/195 (97%)
 Frame = -3

Query: 585 NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTVLGPFFQNSYSEVKVGSCPEC 406
           NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGT+LGPFFQNSY+EVKVGSCPEC
Sbjct: 341 NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTILGPFFQNSYTEVKVGSCPEC 400

Query: 405 QSKGPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT 226
           QSKGPFTVN+EQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT
Sbjct: 401 QSKGPFTVNVEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT 460

Query: 225 GIYTNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTEEDKKEIENLSKDPRIGE 46
           GIYTNNFDLSLNTKNGFPVFATVVEANYV KKQDLFSAYKLT+EDK EIE LSKDPRIGE
Sbjct: 461 GIYTNNFDLSLNTKNGFPVFATVVEANYVAKKQDLFSAYKLTDEDKTEIEKLSKDPRIGE 520

Query: 45  RIFKSIAPSIYGHED 1
           RI KSIAPSIYGHED
Sbjct: 521 RIVKSIAPSIYGHED 535


>ref|XP_002273675.1| PREDICTED: DNA replication licensing factor mcm2 [Vitis vinifera]
           gi|296085553|emb|CBI29285.3| unnamed protein product
           [Vitis vinifera]
          Length = 954

 Score =  385 bits (988), Expect = e-105
 Identities = 187/195 (95%), Positives = 192/195 (98%)
 Frame = -3

Query: 585 NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTVLGPFFQNSYSEVKVGSCPEC 406
           NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDC+KCG +LGPFFQNSYSEVKVGSCPEC
Sbjct: 340 NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGMILGPFFQNSYSEVKVGSCPEC 399

Query: 405 QSKGPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT 226
           QSKGPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT
Sbjct: 400 QSKGPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT 459

Query: 225 GIYTNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTEEDKKEIENLSKDPRIGE 46
           GIYTNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLT+EDK+EIE L+KDPRIGE
Sbjct: 460 GIYTNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGE 519

Query: 45  RIFKSIAPSIYGHED 1
           RI KSIAPSIYGHED
Sbjct: 520 RIVKSIAPSIYGHED 534


>emb|CAN78904.1| hypothetical protein VITISV_022714 [Vitis vinifera]
          Length = 833

 Score =  385 bits (988), Expect = e-105
 Identities = 187/195 (95%), Positives = 192/195 (98%)
 Frame = -3

Query: 585 NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTVLGPFFQNSYSEVKVGSCPEC 406
           NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDC+KCG +LGPFFQNSYSEVKVGSCPEC
Sbjct: 232 NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGMILGPFFQNSYSEVKVGSCPEC 291

Query: 405 QSKGPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT 226
           QSKGPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT
Sbjct: 292 QSKGPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT 351

Query: 225 GIYTNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTEEDKKEIENLSKDPRIGE 46
           GIYTNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLT+EDK+EIE L+KDPRIGE
Sbjct: 352 GIYTNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGE 411

Query: 45  RIFKSIAPSIYGHED 1
           RI KSIAPSIYGHED
Sbjct: 412 RIVKSIAPSIYGHED 426


>ref|XP_004137663.1| PREDICTED: DNA replication licensing factor mcm2-like [Cucumis
           sativus] gi|449497179|ref|XP_004160335.1| PREDICTED: DNA
           replication licensing factor mcm2-like [Cucumis sativus]
          Length = 944

 Score =  384 bits (987), Expect = e-105
 Identities = 183/195 (93%), Positives = 193/195 (98%)
 Frame = -3

Query: 585 NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTVLGPFFQNSYSEVKVGSCPEC 406
           NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDC+KCGT+LGPFFQNSYSEVKVGSCPEC
Sbjct: 330 NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGTILGPFFQNSYSEVKVGSCPEC 389

Query: 405 QSKGPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT 226
           QSKGPFTVN+EQT+YRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT
Sbjct: 390 QSKGPFTVNVEQTVYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT 449

Query: 225 GIYTNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTEEDKKEIENLSKDPRIGE 46
           GIYTNNFDLSLNTKNGFPVF+TVVEANY+TKKQDLFSAYK+T+EDK+EIE L+KDPRIGE
Sbjct: 450 GIYTNNFDLSLNTKNGFPVFSTVVEANYITKKQDLFSAYKITQEDKEEIEKLAKDPRIGE 509

Query: 45  RIFKSIAPSIYGHED 1
           RI KSIAPSIYGHED
Sbjct: 510 RIIKSIAPSIYGHED 524


>gb|AFW60764.1| hypothetical protein ZEAMMB73_559613 [Zea mays]
          Length = 957

 Score =  384 bits (987), Expect = e-105
 Identities = 186/195 (95%), Positives = 191/195 (97%)
 Frame = -3

Query: 585 NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTVLGPFFQNSYSEVKVGSCPEC 406
           NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDC+KCGT+LGPFFQNSY+EVKVGSCPEC
Sbjct: 343 NIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGTILGPFFQNSYTEVKVGSCPEC 402

Query: 405 QSKGPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT 226
           QSKGPFTVN+EQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT
Sbjct: 403 QSKGPFTVNVEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVT 462

Query: 225 GIYTNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTEEDKKEIENLSKDPRIGE 46
           GIYTNNFDLSLNTKNGFPVFATVVEANYV KKQDLFSAYKLT+EDK EIE LSKDPRIGE
Sbjct: 463 GIYTNNFDLSLNTKNGFPVFATVVEANYVAKKQDLFSAYKLTDEDKAEIEKLSKDPRIGE 522

Query: 45  RIFKSIAPSIYGHED 1
           RI KSIAPSIYGHED
Sbjct: 523 RIIKSIAPSIYGHED 537


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