BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032351
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300476.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
emb|CBI26636.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002532558.1| RING-H2 finger protein ATL2B, putative [Rici...    75   5e-13
ref|XP_002869057.1| zinc finger family protein [Arabidopsis lyra...    74   2e-11
ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Rici...    74   2e-11

>ref|XP_002300476.1| predicted protein [Populus trichocarpa] gi|222847734|gb|EEE85281.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
 Frame = +2

Query: 2   FCSGWGFCGGNCWAITGRTIEXXXXXXXXXXXXXXXXXXLELFKSLLNAVNGDYLAKIAN 181
           F  G    G    A+ G+T E                  ++L +S+    NG+ L+K+A 
Sbjct: 53  FALGGALVGSIIGAMKGQTTETGFLRGSGVGAVAGAITAVQLLESI---TNGEPLSKVAL 109

Query: 182 FGSLVNGKLFRV----AMLQAYQWQTGALETSYLENSDIFDVDGTKGISPNCIKKLPDFK 349
             SL+NGK+F      A+L+AYQWQ  ALET+Y E SDI+D    +G+S +CIKKLP+  
Sbjct: 110 LHSLLNGKVFMEWVGPAVLKAYQWQVNALETTYREISDIYDTSEVRGLSEDCIKKLPECI 169

Query: 350 F-SGSKDMDQC 379
           F S S  ++QC
Sbjct: 170 FKSDSNIVEQC 180


>emb|CBI26636.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 53/143 (37%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
 Frame = +2

Query: 2   FCSGWGFCGGNCWAITGRTIEXXXXXXXXXXXXXXXXXXLELFKSLLNAVNGDYLAKIAN 181
           F  G    G    AI G+T E                  L+L +S+     G+ L+K A 
Sbjct: 85  FALGGAVVGTITGAIKGQTTETGFFRGSGIGAVTGAITALQLLESV---AAGESLSKAAL 141

Query: 182 FGSLVNGKLFRV----AMLQAYQWQTGALETSYLENSDIFDVDGTKGISPNCIKKLPDFK 349
             SLVNGK+F      A+L+AYQWQ   LET+Y E  D +++ G KG+  N I+KLP   
Sbjct: 142 LCSLVNGKVFMEWVSPAVLKAYQWQISTLETNYGETEDFYNISGAKGLPHNFIEKLPKSN 201

Query: 350 FSGSKDMDQCGGKICCSICLQDF 418
           F  S    +   +I C+ICLQDF
Sbjct: 202 FCHSN--AEMYNEISCTICLQDF 222


>ref|XP_002532558.1| RING-H2 finger protein ATL2B, putative [Ricinus communis]
           gi|223527713|gb|EEF29819.1| RING-H2 finger protein
           ATL2B, putative [Ricinus communis]
          Length = 223

 Score = 75.5 bits (184), Expect(2) = 5e-13
 Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
 Frame = +2

Query: 137 LLNAVNGDYLAKIANFGSLVNGKLFRV----AMLQAYQWQTGALETSYLENSDIFDVDGT 304
           L +  +G+  +K+A F SL+NGK+F      A+L+AYQWQ  ALET+Y E SDI D  G 
Sbjct: 95  LESVADGEPFSKVALFYSLMNGKVFMEWVSPAVLKAYQWQMSALETTYREISDILDTSGN 154

Query: 305 KGISPNCIKKLPDFKFSGS 361
           +G+S N I+ LPDF F  S
Sbjct: 155 RGLSENLIQNLPDFTFQSS 173



 Score = 23.5 bits (49), Expect(2) = 5e-13
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 9   LGGAFVGAIAGPLQAEL*KLGF 74
           LGGA VG + G ++ +  + GF
Sbjct: 55  LGGAMVGTVIGAMKGQTTETGF 76


>ref|XP_002869057.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314893|gb|EFH45316.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 236

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
 Frame = +2

Query: 188 SLVNGKLFRV----AMLQAYQWQTGALETSYLENSDIFDVDGTKGISPNCIKKLPDFKFS 355
           SL++G+L R     AML A Q Q GA++T++ E S IFD  G+KG++ + + K+P  K +
Sbjct: 118 SLISGRLVRERIGPAMLSAVQSQMGAVDTTFEELSSIFDTGGSKGLTGDLVDKIPKIKIT 177

Query: 356 GSKDMDQCGGKICCSICLQDF 418
           G  ++D  G K  CS+CLQDF
Sbjct: 178 GKNNLDASGNKDSCSVCLQDF 198


>ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Ricinus communis]
           gi|223529804|gb|EEF31739.1| RING-H2 finger protein
           ATL4M, putative [Ricinus communis]
          Length = 235

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
 Frame = +2

Query: 155 GDYLAKIANFGSLVNGKLFRV----AMLQAYQWQTGALETSYLENSDIFDVDGTKGISPN 322
           G  L  I    SL++G+L R     AML A Q Q GA+ETS+ E  +IFD  G KG++ +
Sbjct: 106 GCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETSFEEVQNIFDTGGAKGLTGD 165

Query: 323 CIKKLPDFKFSGSKDMDQCGGKICCSICLQDF 418
            ++K+P  K + +  +D  G K+ CS+CLQDF
Sbjct: 166 TVEKIPKIKITSNNTIDASGEKVACSVCLQDF 197