BLASTX nr result

ID: Coptis21_contig00032349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032349
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB44316.1| serine palmitoyltransferase [Solanum tuberosum]        82   3e-14
dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana...    82   3e-14
ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 iso...    82   6e-14
ref|XP_002321740.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 iso...    82   6e-14

>emb|CAB44316.1| serine palmitoyltransferase [Solanum tuberosum]
          Length = 489

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = -2

Query: 249 ELIEYLKYTCPAHLYGTSISPPAAQQILSAIKVILGEDGCSRG 121
           ELIEYLKY+CPAHLY TSISPPAAQQI+SAIKVILGEDG SRG
Sbjct: 325 ELIEYLKYSCPAHLYATSISPPAAQQIISAIKVILGEDGTSRG 367


>dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana tabacum]
           gi|159506876|gb|ABW97709.1| serine palmitoyltransferase
           long chain base subunit [Nicotiana benthamiana]
          Length = 489

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = -2

Query: 249 ELIEYLKYTCPAHLYGTSISPPAAQQILSAIKVILGEDGCSRG 121
           ELIE+LKYTCPAHLY TSISPPAAQQI+SAIKVILGEDG SRG
Sbjct: 325 ELIEFLKYTCPAHLYATSISPPAAQQIISAIKVILGEDGSSRG 367


>ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 isoform 2 [Vitis vinifera]
           gi|297734488|emb|CBI15735.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = -2

Query: 249 ELIEYLKYTCPAHLYGTSISPPAAQQILSAIKVILGEDGCSRG 121
           ELI+YLKYTCPAHLY TSISPPAAQQI+S+IKVILGEDG SRG
Sbjct: 349 ELIQYLKYTCPAHLYATSISPPAAQQIISSIKVILGEDGSSRG 391


>ref|XP_002321740.1| predicted protein [Populus trichocarpa] gi|222868736|gb|EEF05867.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = -2

Query: 249 ELIEYLKYTCPAHLYGTSISPPAAQQILSAIKVILGEDGCSRG 121
           ELI+YLKYTCPAHLY TSISPPAAQQI+S+IKVILGEDG SRG
Sbjct: 325 ELIQYLKYTCPAHLYATSISPPAAQQIISSIKVILGEDGSSRG 367


>ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 isoform 1 [Vitis vinifera]
          Length = 489

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = -2

Query: 249 ELIEYLKYTCPAHLYGTSISPPAAQQILSAIKVILGEDGCSRG 121
           ELI+YLKYTCPAHLY TSISPPAAQQI+S+IKVILGEDG SRG
Sbjct: 325 ELIQYLKYTCPAHLYATSISPPAAQQIISSIKVILGEDGSSRG 367


Top