BLASTX nr result

ID: Coptis21_contig00032304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032304
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323187.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_002323185.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002333238.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002323186.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_002323188.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22

>ref|XP_002323187.1| predicted protein [Populus trichocarpa] gi|222867817|gb|EEF04948.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  119 bits (299), Expect = 2e-25
 Identities = 65/120 (54%), Positives = 73/120 (60%)
 Frame = +3

Query: 36  MKYSLAANKKPHAVCIPLPFQSHIIAMLKFAKLLHCKGFHITFXXXXXXXXXXXXXXXXX 215
           M YS+ A+ KPHAVC+P PFQSHI +MLK AKLLH KGF                     
Sbjct: 1   MVYSVLADHKPHAVCLPSPFQSHIKSMLKLAKLLHHKGF--------------------- 39

Query: 216 XXXXXXXXXXXXXGFHITFVNTEYNHQRILKSRGPDSLKGLPDFQFESIPDGLAVSDINV 395
                          HITFVNTE+NH+R+LKSRGPDSL GLPDF+FESIPDGL  SD NV
Sbjct: 40  ---------------HITFVNTEFNHKRLLKSRGPDSLNGLPDFRFESIPDGLPPSDENV 84


>ref|XP_002323185.1| predicted protein [Populus trichocarpa] gi|222867815|gb|EEF04946.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/119 (52%), Positives = 71/119 (59%)
 Frame = +3

Query: 36  MKYSLAANKKPHAVCIPLPFQSHIIAMLKFAKLLHCKGFHITFXXXXXXXXXXXXXXXXX 215
           M   + A+ KPHAVC+P P+QSHI +MLK AKLLH KGF                     
Sbjct: 1   MTCKILADHKPHAVCLPSPYQSHIKSMLKLAKLLHHKGF--------------------- 39

Query: 216 XXXXXXXXXXXXXGFHITFVNTEYNHQRILKSRGPDSLKGLPDFQFESIPDGLAVSDIN 392
                          HITFVNTE+NH+R+LKSRGPDSLKGLPDF+FESIPDGL  SD N
Sbjct: 40  ---------------HITFVNTEFNHKRLLKSRGPDSLKGLPDFRFESIPDGLPPSDEN 83


>ref|XP_002333238.1| predicted protein [Populus trichocarpa] gi|222835800|gb|EEE74235.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/119 (52%), Positives = 71/119 (59%)
 Frame = +3

Query: 36  MKYSLAANKKPHAVCIPLPFQSHIIAMLKFAKLLHCKGFHITFXXXXXXXXXXXXXXXXX 215
           M   + A+ KPHAVC+P P+QSHI +MLK AKLLH KGF                     
Sbjct: 1   MTCKILADHKPHAVCLPSPYQSHIKSMLKLAKLLHHKGF--------------------- 39

Query: 216 XXXXXXXXXXXXXGFHITFVNTEYNHQRILKSRGPDSLKGLPDFQFESIPDGLAVSDIN 392
                          HITFVNTE+NH+R+LKSRGPDSLKGLPDF+FESIPDGL  SD N
Sbjct: 40  ---------------HITFVNTEFNHKRLLKSRGPDSLKGLPDFRFESIPDGLPPSDEN 83


>ref|XP_002323186.1| predicted protein [Populus trichocarpa] gi|222867816|gb|EEF04947.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/119 (51%), Positives = 71/119 (59%)
 Frame = +3

Query: 36  MKYSLAANKKPHAVCIPLPFQSHIIAMLKFAKLLHCKGFHITFXXXXXXXXXXXXXXXXX 215
           M   + A+ KPHAVC+P P+QSHI +MLK AKLLH KGF                     
Sbjct: 1   MTCKILADHKPHAVCLPSPYQSHIKSMLKLAKLLHQKGF--------------------- 39

Query: 216 XXXXXXXXXXXXXGFHITFVNTEYNHQRILKSRGPDSLKGLPDFQFESIPDGLAVSDIN 392
                          HITFVNTE+NH+R+LKSRGPDSLKGLPDF+FES+PDGL  SD N
Sbjct: 40  ---------------HITFVNTEFNHKRLLKSRGPDSLKGLPDFRFESVPDGLPPSDEN 83


>ref|XP_002323188.1| predicted protein [Populus trichocarpa] gi|222867818|gb|EEF04949.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/119 (49%), Positives = 70/119 (58%)
 Frame = +3

Query: 36  MKYSLAANKKPHAVCIPLPFQSHIIAMLKFAKLLHCKGFHITFXXXXXXXXXXXXXXXXX 215
           M  +++A+ KPH VCIP P QSHI ++LK AKLLH KGF                     
Sbjct: 1   MACNISADHKPHVVCIPTPAQSHIKSVLKLAKLLHYKGF--------------------- 39

Query: 216 XXXXXXXXXXXXXGFHITFVNTEYNHQRILKSRGPDSLKGLPDFQFESIPDGLAVSDIN 392
                          HITFVNTE+NH+R+LKSRGPDS+ GLPDF+FESIPDGL  SD N
Sbjct: 40  ---------------HITFVNTEFNHRRLLKSRGPDSMNGLPDFRFESIPDGLPPSDEN 83


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