BLASTX nr result

ID: Coptis21_contig00032298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032298
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447600.1| hypothetical protein SORBIDRAFT_06g005801 [S...    83   5e-18
ref|XP_002450590.1| hypothetical protein SORBIDRAFT_05g007530 [S...    93   2e-17
ref|XP_002450403.1| hypothetical protein SORBIDRAFT_05g004780 [S...    93   2e-17
ref|XP_002460318.1| hypothetical protein SORBIDRAFT_02g026410 [S...    93   2e-17
ref|XP_002457467.1| hypothetical protein SORBIDRAFT_03g007660 [S...    92   6e-17

>ref|XP_002447600.1| hypothetical protein SORBIDRAFT_06g005801 [Sorghum bicolor]
           gi|241938783|gb|EES11928.1| hypothetical protein
           SORBIDRAFT_06g005801 [Sorghum bicolor]
          Length = 232

 Score = 83.2 bits (204), Expect(2) = 5e-18
 Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1   WWSNYGNHTPNLQRMAXXXXXXXXXXXGCERNWSAFKGIHTKKRNRLDAARLEHLVYVQF 180
           WW NYG   P LQRMA           GCER WS F+G HTKKRN+L + RL  LV+VQ+
Sbjct: 56  WWGNYGTQVPTLQRMAIRILSLTSSSSGCERTWSCFEGNHTKKRNKLTSERLNQLVFVQY 115

Query: 181 NAKLIDKNRK-EKEEEVDVLL 240
           N K+  K  K +K + +D LL
Sbjct: 116 NNKMNGKKVKAKKNQNMDPLL 136



 Score = 32.7 bits (73), Expect(2) = 5e-18
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 12/60 (20%)
 Frame = +3

Query: 246 EASKAQ*WIVHIGDNEEVDPGSGLTGGMVGE------------SSKANNIRELHEEDFVS 389
           ++++AQ W+V  GD E+ +P  GLT  ++ E            S++   +R++ E++F S
Sbjct: 139 DSNRAQGWLVEGGDEEDAEPVCGLTWKLIEEACGVEECGKLRRSARLAQMRDVSEDEFQS 198


>ref|XP_002450590.1| hypothetical protein SORBIDRAFT_05g007530 [Sorghum bicolor]
           gi|241936433|gb|EES09578.1| hypothetical protein
           SORBIDRAFT_05g007530 [Sorghum bicolor]
          Length = 361

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/82 (54%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   WWSNYGNHTPNLQRMAXXXXXXXXXXXGCERNWSAFKGIHTKKRNRLDAARLEHLVYVQF 180
           WW  YG  TP LQ+MA           GCERNWS F+ IHTKKRNRL  ARL  LVY+QF
Sbjct: 194 WWRLYGYETPALQKMATRILSLTSSSSGCERNWSGFEAIHTKKRNRLTTARLNKLVYIQF 253

Query: 181 NAKLIDKNRKEKEEE-VDVLLA 243
           N+KL+ K  K K ++ +DVLL+
Sbjct: 254 NSKLLSKREKIKSKKIIDVLLS 275


>ref|XP_002450403.1| hypothetical protein SORBIDRAFT_05g004780 [Sorghum bicolor]
           gi|241936246|gb|EES09391.1| hypothetical protein
           SORBIDRAFT_05g004780 [Sorghum bicolor]
          Length = 801

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/82 (54%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   WWSNYGNHTPNLQRMAXXXXXXXXXXXGCERNWSAFKGIHTKKRNRLDAARLEHLVYVQF 180
           WW  YG  TP LQ+MA           GCERNWS F+ IHTKKRNRL  ARL  LVY+QF
Sbjct: 634 WWRLYGYETPALQKMATRILSLTSSSSGCERNWSGFEAIHTKKRNRLTTARLNKLVYIQF 693

Query: 181 NAKLIDKNRKEKEEE-VDVLLA 243
           N+KL+ K  K K ++ +DVLL+
Sbjct: 694 NSKLLSKREKIKSKKIIDVLLS 715


>ref|XP_002460318.1| hypothetical protein SORBIDRAFT_02g026410 [Sorghum bicolor]
           gi|241923695|gb|EER96839.1| hypothetical protein
           SORBIDRAFT_02g026410 [Sorghum bicolor]
          Length = 338

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/82 (54%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   WWSNYGNHTPNLQRMAXXXXXXXXXXXGCERNWSAFKGIHTKKRNRLDAARLEHLVYVQF 180
           WW  YG  TP LQ+MA           GCERNWS F+ IHTKKRNRL  ARL  LVY+QF
Sbjct: 171 WWRLYGYETPALQKMATRILSLTSSSSGCERNWSGFEAIHTKKRNRLTTARLNKLVYIQF 230

Query: 181 NAKLIDKNRKEKEEE-VDVLLA 243
           N+KL+ K  K K ++ +DVLL+
Sbjct: 231 NSKLLSKREKIKSKKIIDVLLS 252


>ref|XP_002457467.1| hypothetical protein SORBIDRAFT_03g007660 [Sorghum bicolor]
           gi|241929442|gb|EES02587.1| hypothetical protein
           SORBIDRAFT_03g007660 [Sorghum bicolor]
          Length = 361

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   WWSNYGNHTPNLQRMAXXXXXXXXXXXGCERNWSAFKGIHTKKRNRLDAARLEHLVYVQF 180
           WW  YG  TP LQ++A           GCERNWS F+ IHTKKRNRL  ARL  LVY+QF
Sbjct: 194 WWRLYGYETPALQKIATRILSLTSSSSGCERNWSGFEAIHTKKRNRLTTARLNKLVYIQF 253

Query: 181 NAKLIDKNRKEKEEE-VDVLLA 243
           N+KL+ K  K K ++ +DVLL+
Sbjct: 254 NSKLLSKKEKIKSKKIIDVLLS 275


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