BLASTX nr result

ID: Coptis21_contig00032291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032291
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284070.1| PREDICTED: transmembrane protein 234 homolog...   132   3e-29
ref|XP_002325011.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|NP_197458.1| uncharacterized protein [Arabidopsis thaliana] ...   111   7e-23
ref|XP_003530593.1| PREDICTED: transmembrane protein 234 homolog...   110   1e-22
ref|XP_002871895.1| hypothetical protein ARALYDRAFT_488851 [Arab...   110   2e-22

>ref|XP_002284070.1| PREDICTED: transmembrane protein 234 homolog [Vitis vinifera]
           gi|297738785|emb|CBI28030.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  132 bits (332), Expect = 3e-29
 Identities = 73/134 (54%), Positives = 84/134 (62%), Gaps = 4/134 (2%)
 Frame = +2

Query: 5   EKMIAIGLIWGATNAIMRRGALIWDKKLQS----VTKPHQSSQLHQKILGYXXXXXXXXX 172
           EKMIA+GL+WG+TNAIMRRGALIWD+K++S     TKP   S LHQ++L           
Sbjct: 6   EKMIAVGLVWGSTNAIMRRGALIWDRKVRSSSAQTTKP---STLHQRLLATYKNWLNLLL 62

Query: 173 IWQYSIPFVVNLXXXXXXXXILSDSPISLXXXXXXXXXXXXXXXXXXXLGEETRVGFALL 352
            WQYSIPF++NL        ILSD+PISL                   LGEETRV  ALL
Sbjct: 63  TWQYSIPFLINLSASATFFAILSDTPISLAVPVTNATTFAATAVSAMLLGEETRVWLALL 122

Query: 353 GTFLIVLGVWICIM 394
           GTFLIVLGVWICIM
Sbjct: 123 GTFLIVLGVWICIM 136


>ref|XP_002325011.1| predicted protein [Populus trichocarpa] gi|222866445|gb|EEF03576.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  112 bits (280), Expect = 3e-23
 Identities = 62/134 (46%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
 Frame = +2

Query: 5   EKMIAIGLIWGATNAIMRRGALIWD-KKLQSVTKPHQSS-----QLHQKILGYXXXXXXX 166
           EKMI IGL+WGATNA++RRGAL+WD + L+S +    SS     + HQK+L         
Sbjct: 7   EKMITIGLVWGATNALIRRGALLWDHQSLKSSSSSSSSSLSSPPKFHQKLLSSLKSWLSL 66

Query: 167 XXIWQYSIPFVVNLXXXXXXXXILSDSPISLXXXXXXXXXXXXXXXXXXXLGEETRVGFA 346
              WQYS+PF++NL        ILSD+PISL                   LGE+TRV FA
Sbjct: 67  LIFWQYSLPFLLNLSASAIFFAILSDTPISLAVPVTNATTFAATAVFGMLLGEDTRVDFA 126

Query: 347 LLGTFLIVLGVWIC 388
           LLGT  IV+GVW+C
Sbjct: 127 LLGTGSIVIGVWLC 140


>ref|NP_197458.1| uncharacterized protein [Arabidopsis thaliana]
           gi|15027867|gb|AAK76464.1| unknown protein [Arabidopsis
           thaliana] gi|19310721|gb|AAL85091.1| unknown protein
           [Arabidopsis thaliana] gi|332005343|gb|AED92726.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 137

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/132 (43%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
 Frame = +2

Query: 5   EKMIAIGLIWGATNAIMRRGALIWDK-KLQSVTKPHQSS-QLHQKILGYXXXXXXXXXIW 178
           +KM+A+GL+WGATNA++RRGAL WDK K  S T+ H    Q+ +KI+            W
Sbjct: 6   DKMVAVGLVWGATNALIRRGALAWDKTKSSSTTESHSPPLQIRRKIMIALRDWINLLLFW 65

Query: 179 QYSIPFVVNLXXXXXXXXILSDSPISLXXXXXXXXXXXXXXXXXXXLGEETRVGFALLGT 358
           QYSIPF++NL        +LS +PISL                   LGEET++G ALLGT
Sbjct: 66  QYSIPFLINLSASATFFALLSHAPISLAVPVTNATTFAATAAFGILLGEETQIGLALLGT 125

Query: 359 FLIVLGVWICIM 394
             IV G+W+C++
Sbjct: 126 SFIVFGIWLCVL 137


>ref|XP_003530593.1| PREDICTED: transmembrane protein 234 homolog [Glycine max]
          Length = 132

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/129 (46%), Positives = 74/129 (57%)
 Frame = +2

Query: 5   EKMIAIGLIWGATNAIMRRGALIWDKKLQSVTKPHQSSQLHQKILGYXXXXXXXXXIWQY 184
           EKMIA+G++WGATNAIMRRGAL+WD+ L+S  KP+  S L QK+            IWQY
Sbjct: 2   EKMIAVGIVWGATNAIMRRGALLWDEALKSSAKPNPHSTLCQKMRISLGNWVKLLSIWQY 61

Query: 185 SIPFVVNLXXXXXXXXILSDSPISLXXXXXXXXXXXXXXXXXXXLGEETRVGFALLGTFL 364
           SIPF++NL        ILSD+P+SL                   LGE T +  A  GT L
Sbjct: 62  SIPFLINLSASATFFAILSDAPLSLAVPVTNATTFAATAVFGILLGERTHLPRAFFGTAL 121

Query: 365 IVLGVWICI 391
           IVLG+  CI
Sbjct: 122 IVLGLCFCI 130


>ref|XP_002871895.1| hypothetical protein ARALYDRAFT_488851 [Arabidopsis lyrata subsp.
           lyrata] gi|297317732|gb|EFH48154.1| hypothetical protein
           ARALYDRAFT_488851 [Arabidopsis lyrata subsp. lyrata]
          Length = 138

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
 Frame = +2

Query: 5   EKMIAIGLIWGATNAIMRRGALIWDKKLQSVT---KPHQSSQLHQKILGYXXXXXXXXXI 175
           EKM+A+GL+WGATNA++RRGAL WD +  S+T    P    Q+ +KI+            
Sbjct: 6   EKMVAVGLLWGATNALIRRGALAWDNRKSSLTTESPPPPPLQIRRKIMIALRDWINLLLF 65

Query: 176 WQYSIPFVVNLXXXXXXXXILSDSPISLXXXXXXXXXXXXXXXXXXXLGEETRVGFALLG 355
           WQYSIPF++NL        +LS +PIS+                   LGEET++G ALLG
Sbjct: 66  WQYSIPFLINLSASATFFALLSHAPISIAVPVTNATTFAATAAFGILLGEETQIGLALLG 125

Query: 356 TFLIVLGVWICIM 394
           T  IV G+W+C++
Sbjct: 126 TSFIVFGIWLCVL 138


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