BLASTX nr result
ID: Coptis21_contig00032291
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00032291 (429 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284070.1| PREDICTED: transmembrane protein 234 homolog... 132 3e-29 ref|XP_002325011.1| predicted protein [Populus trichocarpa] gi|2... 112 3e-23 ref|NP_197458.1| uncharacterized protein [Arabidopsis thaliana] ... 111 7e-23 ref|XP_003530593.1| PREDICTED: transmembrane protein 234 homolog... 110 1e-22 ref|XP_002871895.1| hypothetical protein ARALYDRAFT_488851 [Arab... 110 2e-22 >ref|XP_002284070.1| PREDICTED: transmembrane protein 234 homolog [Vitis vinifera] gi|297738785|emb|CBI28030.3| unnamed protein product [Vitis vinifera] Length = 136 Score = 132 bits (332), Expect = 3e-29 Identities = 73/134 (54%), Positives = 84/134 (62%), Gaps = 4/134 (2%) Frame = +2 Query: 5 EKMIAIGLIWGATNAIMRRGALIWDKKLQS----VTKPHQSSQLHQKILGYXXXXXXXXX 172 EKMIA+GL+WG+TNAIMRRGALIWD+K++S TKP S LHQ++L Sbjct: 6 EKMIAVGLVWGSTNAIMRRGALIWDRKVRSSSAQTTKP---STLHQRLLATYKNWLNLLL 62 Query: 173 IWQYSIPFVVNLXXXXXXXXILSDSPISLXXXXXXXXXXXXXXXXXXXLGEETRVGFALL 352 WQYSIPF++NL ILSD+PISL LGEETRV ALL Sbjct: 63 TWQYSIPFLINLSASATFFAILSDTPISLAVPVTNATTFAATAVSAMLLGEETRVWLALL 122 Query: 353 GTFLIVLGVWICIM 394 GTFLIVLGVWICIM Sbjct: 123 GTFLIVLGVWICIM 136 >ref|XP_002325011.1| predicted protein [Populus trichocarpa] gi|222866445|gb|EEF03576.1| predicted protein [Populus trichocarpa] Length = 143 Score = 112 bits (280), Expect = 3e-23 Identities = 62/134 (46%), Positives = 78/134 (58%), Gaps = 6/134 (4%) Frame = +2 Query: 5 EKMIAIGLIWGATNAIMRRGALIWD-KKLQSVTKPHQSS-----QLHQKILGYXXXXXXX 166 EKMI IGL+WGATNA++RRGAL+WD + L+S + SS + HQK+L Sbjct: 7 EKMITIGLVWGATNALIRRGALLWDHQSLKSSSSSSSSSLSSPPKFHQKLLSSLKSWLSL 66 Query: 167 XXIWQYSIPFVVNLXXXXXXXXILSDSPISLXXXXXXXXXXXXXXXXXXXLGEETRVGFA 346 WQYS+PF++NL ILSD+PISL LGE+TRV FA Sbjct: 67 LIFWQYSLPFLLNLSASAIFFAILSDTPISLAVPVTNATTFAATAVFGMLLGEDTRVDFA 126 Query: 347 LLGTFLIVLGVWIC 388 LLGT IV+GVW+C Sbjct: 127 LLGTGSIVIGVWLC 140 >ref|NP_197458.1| uncharacterized protein [Arabidopsis thaliana] gi|15027867|gb|AAK76464.1| unknown protein [Arabidopsis thaliana] gi|19310721|gb|AAL85091.1| unknown protein [Arabidopsis thaliana] gi|332005343|gb|AED92726.1| uncharacterized protein [Arabidopsis thaliana] Length = 137 Score = 111 bits (277), Expect = 7e-23 Identities = 57/132 (43%), Positives = 77/132 (58%), Gaps = 2/132 (1%) Frame = +2 Query: 5 EKMIAIGLIWGATNAIMRRGALIWDK-KLQSVTKPHQSS-QLHQKILGYXXXXXXXXXIW 178 +KM+A+GL+WGATNA++RRGAL WDK K S T+ H Q+ +KI+ W Sbjct: 6 DKMVAVGLVWGATNALIRRGALAWDKTKSSSTTESHSPPLQIRRKIMIALRDWINLLLFW 65 Query: 179 QYSIPFVVNLXXXXXXXXILSDSPISLXXXXXXXXXXXXXXXXXXXLGEETRVGFALLGT 358 QYSIPF++NL +LS +PISL LGEET++G ALLGT Sbjct: 66 QYSIPFLINLSASATFFALLSHAPISLAVPVTNATTFAATAAFGILLGEETQIGLALLGT 125 Query: 359 FLIVLGVWICIM 394 IV G+W+C++ Sbjct: 126 SFIVFGIWLCVL 137 >ref|XP_003530593.1| PREDICTED: transmembrane protein 234 homolog [Glycine max] Length = 132 Score = 110 bits (275), Expect = 1e-22 Identities = 60/129 (46%), Positives = 74/129 (57%) Frame = +2 Query: 5 EKMIAIGLIWGATNAIMRRGALIWDKKLQSVTKPHQSSQLHQKILGYXXXXXXXXXIWQY 184 EKMIA+G++WGATNAIMRRGAL+WD+ L+S KP+ S L QK+ IWQY Sbjct: 2 EKMIAVGIVWGATNAIMRRGALLWDEALKSSAKPNPHSTLCQKMRISLGNWVKLLSIWQY 61 Query: 185 SIPFVVNLXXXXXXXXILSDSPISLXXXXXXXXXXXXXXXXXXXLGEETRVGFALLGTFL 364 SIPF++NL ILSD+P+SL LGE T + A GT L Sbjct: 62 SIPFLINLSASATFFAILSDAPLSLAVPVTNATTFAATAVFGILLGERTHLPRAFFGTAL 121 Query: 365 IVLGVWICI 391 IVLG+ CI Sbjct: 122 IVLGLCFCI 130 >ref|XP_002871895.1| hypothetical protein ARALYDRAFT_488851 [Arabidopsis lyrata subsp. lyrata] gi|297317732|gb|EFH48154.1| hypothetical protein ARALYDRAFT_488851 [Arabidopsis lyrata subsp. lyrata] Length = 138 Score = 110 bits (274), Expect = 2e-22 Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 3/133 (2%) Frame = +2 Query: 5 EKMIAIGLIWGATNAIMRRGALIWDKKLQSVT---KPHQSSQLHQKILGYXXXXXXXXXI 175 EKM+A+GL+WGATNA++RRGAL WD + S+T P Q+ +KI+ Sbjct: 6 EKMVAVGLLWGATNALIRRGALAWDNRKSSLTTESPPPPPLQIRRKIMIALRDWINLLLF 65 Query: 176 WQYSIPFVVNLXXXXXXXXILSDSPISLXXXXXXXXXXXXXXXXXXXLGEETRVGFALLG 355 WQYSIPF++NL +LS +PIS+ LGEET++G ALLG Sbjct: 66 WQYSIPFLINLSASATFFALLSHAPISIAVPVTNATTFAATAAFGILLGEETQIGLALLG 125 Query: 356 TFLIVLGVWICIM 394 T IV G+W+C++ Sbjct: 126 TSFIVFGIWLCVL 138