BLASTX nr result

ID: Coptis21_contig00032284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032284
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|1...   189   3e-46
ref|XP_002511315.1| thyroid hormone receptor interactor, putativ...   186   2e-45
ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 ho...   182   2e-44
gb|ACG44901.1| thyroid receptor-interacting protein 13 [Zea mays]     179   3e-43
ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 ho...   178   4e-43

>ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|118485393|gb|ABK94553.1|
           unknown [Populus trichocarpa]
           gi|222858748|gb|EEE96295.1| predicted protein [Populus
           trichocarpa]
          Length = 465

 Score =  189 bits (479), Expect = 3e-46
 Identities = 97/136 (71%), Positives = 112/136 (82%), Gaps = 4/136 (2%)
 Frame = -3

Query: 542 ILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCIQELIRTGILAE----DRLC 375
           ILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSC+QEL+RTGI++     D L 
Sbjct: 322 ILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELLRTGIISNFQDSDYLM 381

Query: 374 LPNYESLRQELNVRDRQEPNTALHLPKQLLEAAEICEGLSGRTLRKLPFLAHAAMPNPCS 195
           LPNY +LR++LN  D QE    L   KQLLEAAE CEG+SGR+LRKLPFLAHAA+ NP S
Sbjct: 382 LPNYSTLREKLNAPDIQEAQPVLPFCKQLLEAAEACEGMSGRSLRKLPFLAHAALSNPNS 441

Query: 194 CDASKFMHTLIHTARR 147
           CDAS+F+  +I TARR
Sbjct: 442 CDASEFLCAMIDTARR 457


>ref|XP_002511315.1| thyroid hormone receptor interactor, putative [Ricinus communis]
           gi|223550430|gb|EEF51917.1| thyroid hormone receptor
           interactor, putative [Ricinus communis]
          Length = 460

 Score =  186 bits (473), Expect = 2e-45
 Identities = 95/136 (69%), Positives = 112/136 (82%), Gaps = 4/136 (2%)
 Frame = -3

Query: 542 ILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCIQELIRTGILAE----DRLC 375
           ILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSC+QELIRTGI++     D L 
Sbjct: 318 ILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTGIISNFQDPDNLV 377

Query: 374 LPNYESLRQELNVRDRQEPNTALHLPKQLLEAAEICEGLSGRTLRKLPFLAHAAMPNPCS 195
           LPNY +L++++N    QE  T + L KQLLEAAE CEGLSGR+LRKLPFLAHAA+ +P S
Sbjct: 378 LPNYPTLKEKMNGSAAQEAQTPVKLGKQLLEAAEACEGLSGRSLRKLPFLAHAALSDPYS 437

Query: 194 CDASKFMHTLIHTARR 147
           CD SKF+ T++  ARR
Sbjct: 438 CDPSKFLSTMMDAARR 453


>ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 homolog [Vitis vinifera]
           gi|297733699|emb|CBI14946.3| unnamed protein product
           [Vitis vinifera]
          Length = 455

 Score =  182 bits (463), Expect = 2e-44
 Identities = 95/136 (69%), Positives = 110/136 (80%), Gaps = 4/136 (2%)
 Frame = -3

Query: 542 ILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCIQELIRTGILAE----DRLC 375
           ILTTSNITAAID+AFVDRADIKAYVGPPT+ ARYEILRSC+QEL+R GIL      DRL 
Sbjct: 312 ILTTSNITAAIDIAFVDRADIKAYVGPPTIHARYEILRSCLQELVRAGILTNSQECDRLS 371

Query: 374 LPNYESLRQELNVRDRQEPNTALHLPKQLLEAAEICEGLSGRTLRKLPFLAHAAMPNPCS 195
           L +Y  L+++LNV   +EP  + HL KQLLEAAE CEGLSGR+LRKLPFLAHAA+ NP S
Sbjct: 372 LLSYTGLKEKLNVAQIEEPGNS-HLCKQLLEAAEACEGLSGRSLRKLPFLAHAALANPYS 430

Query: 194 CDASKFMHTLIHTARR 147
           CD SKF+ T+  TA+R
Sbjct: 431 CDPSKFLCTMTDTAKR 446


>gb|ACG44901.1| thyroid receptor-interacting protein 13 [Zea mays]
          Length = 484

 Score =  179 bits (453), Expect = 3e-43
 Identities = 90/136 (66%), Positives = 108/136 (79%), Gaps = 4/136 (2%)
 Frame = -3

Query: 542 ILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCIQELIRTGILAEDR----LC 375
           ILTTSNIT AID+AFVDRADIKAYVGPPT+QARYEILRSCIQEL+R GIL   +     C
Sbjct: 342 ILTTSNITTAIDIAFVDRADIKAYVGPPTLQARYEILRSCIQELLRVGILTYPQGSSVPC 401

Query: 374 LPNYESLRQELNVRDRQEPNTALHLPKQLLEAAEICEGLSGRTLRKLPFLAHAAMPNPCS 195
           + NY +L+++ +  +  EP+ ALHL   L EAA++CEGLSGR+LRKLPFL HA++ NP  
Sbjct: 402 ILNYSTLKEKKHCPEAAEPHGALHLSNLLYEAAKLCEGLSGRSLRKLPFLTHASVTNPSC 461

Query: 194 CDASKFMHTLIHTARR 147
           CDAS F+HTLI TARR
Sbjct: 462 CDASTFLHTLIQTARR 477


>ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 homolog [Cucumis sativus]
           gi|449487740|ref|XP_004157777.1| PREDICTED: pachytene
           checkpoint protein 2 homolog [Cucumis sativus]
          Length = 456

 Score =  178 bits (452), Expect = 4e-43
 Identities = 88/136 (64%), Positives = 108/136 (79%), Gaps = 4/136 (2%)
 Frame = -3

Query: 542 ILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCIQELIRTGILAEDRLC---- 375
           ILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSC+QELIRTGIL+    C    
Sbjct: 314 ILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTGILSTSEGCDHSM 373

Query: 374 LPNYESLRQELNVRDRQEPNTALHLPKQLLEAAEICEGLSGRTLRKLPFLAHAAMPNPCS 195
           LPNY  L++++N+ + ++ +  LH+ K LL+ AE CEG SGR LRKLPFLAHA + NPC+
Sbjct: 374 LPNYAGLKEKVNIPETEKVDVPLHISKLLLKVAEACEGCSGRFLRKLPFLAHATLANPCT 433

Query: 194 CDASKFMHTLIHTARR 147
            D SKF+  ++ TARR
Sbjct: 434 GDPSKFLFAMLETARR 449


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