BLASTX nr result

ID: Coptis21_contig00032282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032282
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   106   2e-21
emb|CBI21539.3| unnamed protein product [Vitis vinifera]              106   2e-21
emb|CAN60856.1| hypothetical protein VITISV_026074 [Vitis vinifera]   106   2e-21
ref|XP_003579749.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    99   3e-19
emb|CAH66407.1| OSIGBa0093L02.3 [Oryza sativa Indica Group]            99   5e-19

>ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Vitis
           vinifera]
          Length = 641

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 7/99 (7%)
 Frame = +3

Query: 18  SEKLPFIAGLHNLGNNCFLNVILQALASCEPFHQYI-------ESAVEEDGVEEMPLIDA 176
           S +L    GL NLGNNCFLNVILQALASC  F Q++       +S+++E+GVE +PL  A
Sbjct: 72  SSELCLAPGLQNLGNNCFLNVILQALASCFCFRQFLHRIMEESKSSLDEEGVESLPLTTA 131

Query: 177 LASLFGDLCVLHDKRMVLSPRRVMQAMDHYIPSFNLTRQ 293
           L +L  +LC  H  R VLSPR+VM AM  YIP+FNLTRQ
Sbjct: 132 LTTLLEELCATHGGRKVLSPRKVMLAMALYIPNFNLTRQ 170


>emb|CBI21539.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 7/99 (7%)
 Frame = +3

Query: 18  SEKLPFIAGLHNLGNNCFLNVILQALASCEPFHQYI-------ESAVEEDGVEEMPLIDA 176
           S +L    GL NLGNNCFLNVILQALASC  F Q++       +S+++E+GVE +PL  A
Sbjct: 17  SSELCLAPGLQNLGNNCFLNVILQALASCFCFRQFLHRIMEESKSSLDEEGVESLPLTTA 76

Query: 177 LASLFGDLCVLHDKRMVLSPRRVMQAMDHYIPSFNLTRQ 293
           L +L  +LC  H  R VLSPR+VM AM  YIP+FNLTRQ
Sbjct: 77  LTTLLEELCATHGGRKVLSPRKVMLAMALYIPNFNLTRQ 115


>emb|CAN60856.1| hypothetical protein VITISV_026074 [Vitis vinifera]
          Length = 559

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 7/99 (7%)
 Frame = +3

Query: 18  SEKLPFIAGLHNLGNNCFLNVILQALASCEPFHQYI-------ESAVEEDGVEEMPLIDA 176
           S +L    GL NLGNNCFLNVILQALASC  F Q++       +S+++E+GVE +PL  A
Sbjct: 17  SSELCLXPGLQNLGNNCFLNVILQALASCFCFRQFLHRIMEESKSSLDEEGVESLPLTTA 76

Query: 177 LASLFGDLCVLHDKRMVLSPRRVMQAMDHYIPSFNLTRQ 293
           L +L  +LC  H  R VLSPR+VM AM  YIP+FNLTRQ
Sbjct: 77  LTTLLEELCATHGGRKVLSPRKVMLAMALYIPNFNLTRQ 115


>ref|XP_003579749.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like
           [Brachypodium distachyon]
          Length = 501

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 6/98 (6%)
 Frame = +3

Query: 18  SEKLPFIAGLHNLGNNCFLNVILQALASCEPFHQYIESAVEEDGV------EEMPLIDAL 179
           SE+L +  GL NLGNNCFLNVILQALASC  F   ++  +  DG       E+MPLI AL
Sbjct: 59  SERLYYSGGLENLGNNCFLNVILQALASCGHFVSSLDGLLVSDGALPEEQSEKMPLIFAL 118

Query: 180 ASLFGDLCVLHDKRMVLSPRRVMQAMDHYIPSFNLTRQ 293
           +SL  DL ++  +R VL+PRRVM A+  Y+  FNLTRQ
Sbjct: 119 SSLLKDLSIVRGERTVLNPRRVMHALSFYVSHFNLTRQ 156


>emb|CAH66407.1| OSIGBa0093L02.3 [Oryza sativa Indica Group]
          Length = 538

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/99 (53%), Positives = 67/99 (67%), Gaps = 6/99 (6%)
 Frame = +3

Query: 15  SSEKLPFIAGLHNLGNNCFLNVILQALASCEPFHQYI------ESAVEEDGVEEMPLIDA 176
           +S++L +  GL NLGNNCFLNVILQALASC+ F   +      E  + E+  E+MPLI A
Sbjct: 56  NSDRLYYTGGLKNLGNNCFLNVILQALASCDGFVSSLDNLLGSEDVLPEEKSEKMPLIFA 115

Query: 177 LASLFGDLCVLHDKRMVLSPRRVMQAMDHYIPSFNLTRQ 293
           L+SL  DL V+ DKR  LSP RVM A+  Y+  FNLTR+
Sbjct: 116 LSSLIKDLSVVRDKRTELSPHRVMDALSFYVGHFNLTRE 154


Top