BLASTX nr result
ID: Coptis21_contig00032273
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00032273 (400 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243... 153 2e-35 emb|CBI15934.3| unnamed protein product [Vitis vinifera] 153 2e-35 ref|XP_002866281.1| hypothetical protein ARALYDRAFT_358079 [Arab... 133 2e-29 ref|NP_200669.1| putative PHD finger transcription factor [Arabi... 127 9e-28 dbj|BAA97331.1| unnamed protein product [Arabidopsis thaliana] 127 9e-28 >ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera] Length = 1332 Score = 153 bits (386), Expect = 2e-35 Identities = 71/147 (48%), Positives = 93/147 (63%), Gaps = 16/147 (10%) Frame = +1 Query: 7 CDGLVREVRYKFINKDEVSDEPL----------------TESVNYVGRIRHVPPTSVISH 138 CD LVR V+Y I D + + L T+ N+ GRIR +PP Sbjct: 89 CDYLVRNVKYSEILDDRMGERFLESVSVSGAIEGTSVVDTDQCNHRGRIRPLPPQCDFGK 148 Query: 139 WNLHYGLCVDAFYNDAWWEGVVLDHDNGLDKRLVFFPDLGDVETIKFENLRVTFDWDEVI 318 WNLHYGLCVD F+ +AWWEGV+ DH++GL+ R VFFPDLGD T+ +N+R+T DW+E Sbjct: 149 WNLHYGLCVDVFFREAWWEGVIFDHEDGLENRKVFFPDLGDELTVGVDNIRITQDWNEGT 208 Query: 319 EEWKRRGDWLFLELVEKYEEDWFSTVS 399 W+RR +WLFLEL+E+YE+DW VS Sbjct: 209 ATWERRRNWLFLELIEEYEQDWPLNVS 235 >emb|CBI15934.3| unnamed protein product [Vitis vinifera] Length = 994 Score = 153 bits (386), Expect = 2e-35 Identities = 71/147 (48%), Positives = 93/147 (63%), Gaps = 16/147 (10%) Frame = +1 Query: 7 CDGLVREVRYKFINKDEVSDEPL----------------TESVNYVGRIRHVPPTSVISH 138 CD LVR V+Y I D + + L T+ N+ GRIR +PP Sbjct: 26 CDYLVRNVKYSEILDDRMGERFLESVSVSGAIEGTSVVDTDQCNHRGRIRPLPPQCDFGK 85 Query: 139 WNLHYGLCVDAFYNDAWWEGVVLDHDNGLDKRLVFFPDLGDVETIKFENLRVTFDWDEVI 318 WNLHYGLCVD F+ +AWWEGV+ DH++GL+ R VFFPDLGD T+ +N+R+T DW+E Sbjct: 86 WNLHYGLCVDVFFREAWWEGVIFDHEDGLENRKVFFPDLGDELTVGVDNIRITQDWNEGT 145 Query: 319 EEWKRRGDWLFLELVEKYEEDWFSTVS 399 W+RR +WLFLEL+E+YE+DW VS Sbjct: 146 ATWERRRNWLFLELIEEYEQDWPLNVS 172 >ref|XP_002866281.1| hypothetical protein ARALYDRAFT_358079 [Arabidopsis lyrata subsp. lyrata] gi|297312116|gb|EFH42540.1| hypothetical protein ARALYDRAFT_358079 [Arabidopsis lyrata subsp. lyrata] Length = 1047 Score = 133 bits (334), Expect = 2e-29 Identities = 67/143 (46%), Positives = 89/143 (62%), Gaps = 17/143 (11%) Frame = +1 Query: 22 REVRYKFINKDEVSDEPLTESVN-----------------YVGRIRHVPPTSVISHWNLH 150 R +RY I D+ +D L E+V+ + GR+R VPPT NL Sbjct: 59 RSIRYDNILSDDGTDS-LVETVDVSDVVEGLDDCTDVSDTFRGRLRPVPPTLQFGKSNLA 117 Query: 151 YGLCVDAFYNDAWWEGVVLDHDNGLDKRLVFFPDLGDVETIKFENLRVTFDWDEVIEEWK 330 YGLCVD F+++AWWEGV+ DH+NG +KR VFFPDLGD ++LR+T DW+E E W+ Sbjct: 118 YGLCVDVFFSEAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDWNEATETWE 177 Query: 331 RRGDWLFLELVEKYEEDWFSTVS 399 RG WLFL+L+EKY+ED + VS Sbjct: 178 CRGRWLFLDLIEKYKEDNYLPVS 200 >ref|NP_200669.1| putative PHD finger transcription factor [Arabidopsis thaliana] gi|332009693|gb|AED97076.1| putative PHD finger transcription factor [Arabidopsis thaliana] Length = 1065 Score = 127 bits (319), Expect = 9e-28 Identities = 58/112 (51%), Positives = 77/112 (68%) Frame = +1 Query: 64 DEPLTESVNYVGRIRHVPPTSVISHWNLHYGLCVDAFYNDAWWEGVVLDHDNGLDKRLVF 243 D+ S + GR+R VPP ++ NL YGLCVD F++DAWWEGV+ DH+NG +KR VF Sbjct: 80 DDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVF 139 Query: 244 FPDLGDVETIKFENLRVTFDWDEVIEEWKRRGDWLFLELVEKYEEDWFSTVS 399 FPDLGD ++LR+T DW+E E W+ RG WLFL+L+E Y+E + VS Sbjct: 140 FPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVS 191 >dbj|BAA97331.1| unnamed protein product [Arabidopsis thaliana] Length = 1095 Score = 127 bits (319), Expect = 9e-28 Identities = 58/112 (51%), Positives = 77/112 (68%) Frame = +1 Query: 64 DEPLTESVNYVGRIRHVPPTSVISHWNLHYGLCVDAFYNDAWWEGVVLDHDNGLDKRLVF 243 D+ S + GR+R VPP ++ NL YGLCVD F++DAWWEGV+ DH+NG +KR VF Sbjct: 89 DDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVF 148 Query: 244 FPDLGDVETIKFENLRVTFDWDEVIEEWKRRGDWLFLELVEKYEEDWFSTVS 399 FPDLGD ++LR+T DW+E E W+ RG WLFL+L+E Y+E + VS Sbjct: 149 FPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVS 200