BLASTX nr result

ID: Coptis21_contig00032273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032273
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243...   153   2e-35
emb|CBI15934.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002866281.1| hypothetical protein ARALYDRAFT_358079 [Arab...   133   2e-29
ref|NP_200669.1| putative PHD finger transcription factor [Arabi...   127   9e-28
dbj|BAA97331.1| unnamed protein product [Arabidopsis thaliana]        127   9e-28

>ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera]
          Length = 1332

 Score =  153 bits (386), Expect = 2e-35
 Identities = 71/147 (48%), Positives = 93/147 (63%), Gaps = 16/147 (10%)
 Frame = +1

Query: 7   CDGLVREVRYKFINKDEVSDEPL----------------TESVNYVGRIRHVPPTSVISH 138
           CD LVR V+Y  I  D + +  L                T+  N+ GRIR +PP      
Sbjct: 89  CDYLVRNVKYSEILDDRMGERFLESVSVSGAIEGTSVVDTDQCNHRGRIRPLPPQCDFGK 148

Query: 139 WNLHYGLCVDAFYNDAWWEGVVLDHDNGLDKRLVFFPDLGDVETIKFENLRVTFDWDEVI 318
           WNLHYGLCVD F+ +AWWEGV+ DH++GL+ R VFFPDLGD  T+  +N+R+T DW+E  
Sbjct: 149 WNLHYGLCVDVFFREAWWEGVIFDHEDGLENRKVFFPDLGDELTVGVDNIRITQDWNEGT 208

Query: 319 EEWKRRGDWLFLELVEKYEEDWFSTVS 399
             W+RR +WLFLEL+E+YE+DW   VS
Sbjct: 209 ATWERRRNWLFLELIEEYEQDWPLNVS 235


>emb|CBI15934.3| unnamed protein product [Vitis vinifera]
          Length = 994

 Score =  153 bits (386), Expect = 2e-35
 Identities = 71/147 (48%), Positives = 93/147 (63%), Gaps = 16/147 (10%)
 Frame = +1

Query: 7   CDGLVREVRYKFINKDEVSDEPL----------------TESVNYVGRIRHVPPTSVISH 138
           CD LVR V+Y  I  D + +  L                T+  N+ GRIR +PP      
Sbjct: 26  CDYLVRNVKYSEILDDRMGERFLESVSVSGAIEGTSVVDTDQCNHRGRIRPLPPQCDFGK 85

Query: 139 WNLHYGLCVDAFYNDAWWEGVVLDHDNGLDKRLVFFPDLGDVETIKFENLRVTFDWDEVI 318
           WNLHYGLCVD F+ +AWWEGV+ DH++GL+ R VFFPDLGD  T+  +N+R+T DW+E  
Sbjct: 86  WNLHYGLCVDVFFREAWWEGVIFDHEDGLENRKVFFPDLGDELTVGVDNIRITQDWNEGT 145

Query: 319 EEWKRRGDWLFLELVEKYEEDWFSTVS 399
             W+RR +WLFLEL+E+YE+DW   VS
Sbjct: 146 ATWERRRNWLFLELIEEYEQDWPLNVS 172


>ref|XP_002866281.1| hypothetical protein ARALYDRAFT_358079 [Arabidopsis lyrata subsp.
           lyrata] gi|297312116|gb|EFH42540.1| hypothetical protein
           ARALYDRAFT_358079 [Arabidopsis lyrata subsp. lyrata]
          Length = 1047

 Score =  133 bits (334), Expect = 2e-29
 Identities = 67/143 (46%), Positives = 89/143 (62%), Gaps = 17/143 (11%)
 Frame = +1

Query: 22  REVRYKFINKDEVSDEPLTESVN-----------------YVGRIRHVPPTSVISHWNLH 150
           R +RY  I  D+ +D  L E+V+                 + GR+R VPPT      NL 
Sbjct: 59  RSIRYDNILSDDGTDS-LVETVDVSDVVEGLDDCTDVSDTFRGRLRPVPPTLQFGKSNLA 117

Query: 151 YGLCVDAFYNDAWWEGVVLDHDNGLDKRLVFFPDLGDVETIKFENLRVTFDWDEVIEEWK 330
           YGLCVD F+++AWWEGV+ DH+NG +KR VFFPDLGD      ++LR+T DW+E  E W+
Sbjct: 118 YGLCVDVFFSEAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDWNEATETWE 177

Query: 331 RRGDWLFLELVEKYEEDWFSTVS 399
            RG WLFL+L+EKY+ED +  VS
Sbjct: 178 CRGRWLFLDLIEKYKEDNYLPVS 200


>ref|NP_200669.1| putative PHD finger transcription factor [Arabidopsis thaliana]
           gi|332009693|gb|AED97076.1| putative PHD finger
           transcription factor [Arabidopsis thaliana]
          Length = 1065

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/112 (51%), Positives = 77/112 (68%)
 Frame = +1

Query: 64  DEPLTESVNYVGRIRHVPPTSVISHWNLHYGLCVDAFYNDAWWEGVVLDHDNGLDKRLVF 243
           D+    S  + GR+R VPP   ++  NL YGLCVD F++DAWWEGV+ DH+NG +KR VF
Sbjct: 80  DDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVF 139

Query: 244 FPDLGDVETIKFENLRVTFDWDEVIEEWKRRGDWLFLELVEKYEEDWFSTVS 399
           FPDLGD      ++LR+T DW+E  E W+ RG WLFL+L+E Y+E  +  VS
Sbjct: 140 FPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVS 191


>dbj|BAA97331.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1095

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/112 (51%), Positives = 77/112 (68%)
 Frame = +1

Query: 64  DEPLTESVNYVGRIRHVPPTSVISHWNLHYGLCVDAFYNDAWWEGVVLDHDNGLDKRLVF 243
           D+    S  + GR+R VPP   ++  NL YGLCVD F++DAWWEGV+ DH+NG +KR VF
Sbjct: 89  DDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVF 148

Query: 244 FPDLGDVETIKFENLRVTFDWDEVIEEWKRRGDWLFLELVEKYEEDWFSTVS 399
           FPDLGD      ++LR+T DW+E  E W+ RG WLFL+L+E Y+E  +  VS
Sbjct: 149 FPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVS 200