BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032271
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635508.1| PREDICTED: general transcription factor IIH ...   153   2e-35
emb|CBI25914.3| unnamed protein product [Vitis vinifera]              153   2e-35
emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]   152   4e-35
ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription f...   149   3e-34
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ...   149   3e-34

>ref|XP_003635508.1| PREDICTED: general transcription factor IIH subunit 4-like, partial
           [Vitis vinifera]
          Length = 209

 Score =  153 bits (386), Expect = 2e-35
 Identities = 72/95 (75%), Positives = 88/95 (92%)
 Frame = +2

Query: 2   FLESVDRKKDSSYRLNPKFQINLQKYLVHGGVLPREPMPSSITVRLPTLEELDAYALEQW 181
           F E+ DRKK++SYRLNP FQ NLQK+L++GGVLPREPMPS+ITVRLP+L++L+AYAL QW
Sbjct: 57  FTETSDRKKETSYRLNPTFQTNLQKHLIYGGVLPREPMPSNITVRLPSLDDLEAYALGQW 116

Query: 182 ECFLLQLISSSQAERPTSFSSSMMKIFQRGLLSQR 286
           ECFLLQLISS+Q E+ T+FSSSMMK+FQRGLL+QR
Sbjct: 117 ECFLLQLISSTQTEKLTNFSSSMMKVFQRGLLTQR 151


>emb|CBI25914.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score =  153 bits (386), Expect = 2e-35
 Identities = 72/95 (75%), Positives = 88/95 (92%)
 Frame = +2

Query: 2   FLESVDRKKDSSYRLNPKFQINLQKYLVHGGVLPREPMPSSITVRLPTLEELDAYALEQW 181
           F E+ DRKK++SYRLNP FQ NLQK+L++GGVLPREPMPS+ITVRLP+L++L+AYAL QW
Sbjct: 57  FTETSDRKKETSYRLNPTFQTNLQKHLIYGGVLPREPMPSNITVRLPSLDDLEAYALGQW 116

Query: 182 ECFLLQLISSSQAERPTSFSSSMMKIFQRGLLSQR 286
           ECFLLQLISS+Q E+ T+FSSSMMK+FQRGLL+QR
Sbjct: 117 ECFLLQLISSTQTEKLTNFSSSMMKVFQRGLLTQR 151


>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
          Length = 451

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/95 (74%), Positives = 88/95 (92%)
 Frame = +2

Query: 2   FLESVDRKKDSSYRLNPKFQINLQKYLVHGGVLPREPMPSSITVRLPTLEELDAYALEQW 181
           F E+ DRKK++SYRLNP FQ NLQK+L++GGVLPREPMPS+ITVRLP+L++L+AYAL QW
Sbjct: 88  FTETSDRKKETSYRLNPTFQTNLQKHLIYGGVLPREPMPSNITVRLPSLDDLEAYALGQW 147

Query: 182 ECFLLQLISSSQAERPTSFSSSMMKIFQRGLLSQR 286
           ECFLLQLISS+Q E+ T+FSSS+MK+FQRGLL+QR
Sbjct: 148 ECFLLQLISSTQTEKLTNFSSSLMKVFQRGLLTQR 182


>ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like,
           partial [Cucumis sativus]
          Length = 296

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/95 (71%), Positives = 87/95 (91%)
 Frame = +2

Query: 2   FLESVDRKKDSSYRLNPKFQINLQKYLVHGGVLPREPMPSSITVRLPTLEELDAYALEQW 181
           F+E+ DRK++++YRLNP FQ NLQK L+HG VL REPMPS+ITVRLP+LE+L+AYAL+QW
Sbjct: 88  FIETADRKRETTYRLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQW 147

Query: 182 ECFLLQLISSSQAERPTSFSSSMMKIFQRGLLSQR 286
           ECFLLQLI+S QAE+P++ SSS+MK+FQ+GLLSQR
Sbjct: 148 ECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQR 182


>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
           sativus]
          Length = 451

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/95 (71%), Positives = 87/95 (91%)
 Frame = +2

Query: 2   FLESVDRKKDSSYRLNPKFQINLQKYLVHGGVLPREPMPSSITVRLPTLEELDAYALEQW 181
           F+E+ DRK++++YRLNP FQ NLQK L+HG VL REPMPS+ITVRLP+LE+L+AYAL+QW
Sbjct: 88  FIETADRKRETTYRLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQW 147

Query: 182 ECFLLQLISSSQAERPTSFSSSMMKIFQRGLLSQR 286
           ECFLLQLI+S QAE+P++ SSS+MK+FQ+GLLSQR
Sbjct: 148 ECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQR 182