BLASTX nr result

ID: Coptis21_contig00032269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032269
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   135   4e-30
ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4...   130   2e-28
ref|XP_003533361.1| PREDICTED: ABC transporter C family member 4...   128   7e-28
ref|XP_003628563.1| Multidrug resistance protein ABC transporter...   122   5e-26
ref|XP_002321011.1| multidrug resistance protein ABC transporter...   122   5e-26

>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  135 bits (341), Expect = 4e-30
 Identities = 71/160 (44%), Positives = 98/160 (61%), Gaps = 11/160 (6%)
 Frame = +3

Query: 123 FSAILQWLRFIFLSPCPQRAIFSSVDXXXXXXXXXXXXQKLCSRTHSND----------- 269
           FS ILQWLRFIFLSPCPQRA+ SS+D            QKL SR  SN            
Sbjct: 25  FSLILQWLRFIFLSPCPQRALLSSIDLLFLLTLIAFSVQKLYSRFISNGRSSSAINKPLI 84

Query: 270 RNNISHLRTSLWYNVTLFLSALLAITYTVLSVLAFTKAAQSSWELVEAIFRXXXXXXXXX 449
           RNN + LRT+LW+ +TL  +ALLA+ +  L +LAF + AQ  W+L++A+F          
Sbjct: 85  RNNRARLRTTLWFKLTLTATALLAVCHGFLCILAFARGAQMPWKLIDALFWLVEAITHFL 144

Query: 450 XXXXXXXEKRFKAVTHPVTLRVYWIVNFVVVALFSTSAII 569
                   KRF+AVT+P++LR++W+V+F++ +LF+TS II
Sbjct: 145 ITILIAHGKRFQAVTYPLSLRIFWVVSFIISSLFTTSGII 184


>ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score =  130 bits (326), Expect = 2e-28
 Identities = 69/157 (43%), Positives = 91/157 (57%), Gaps = 11/157 (7%)
 Frame = +3

Query: 132 ILQWLRFIFLSPCPQRAIFSSVDXXXXXXXXXXXXQKLCSRTHSNDRNNI---------- 281
           I+QWLRFIFLSPCPQR + S+VD             KL SR  SN  +N           
Sbjct: 30  IVQWLRFIFLSPCPQRVLLSAVDSIFLLSLLAFAAAKLYSRFTSNATSNSTITKPLLQEK 89

Query: 282 -SHLRTSLWYNVTLFLSALLAITYTVLSVLAFTKAAQSSWELVEAIFRXXXXXXXXXXXX 458
            S  + + W+ + L ++ LLAI YTVLS+LAFT+ +  SW+L+EA+FR            
Sbjct: 90  DSDYKVTFWFKLPLLVTTLLAIAYTVLSILAFTQTSLPSWKLIEALFRLFQAVSNIVVAI 149

Query: 459 XXXXEKRFKAVTHPVTLRVYWIVNFVVVALFSTSAII 569
               EK+FKA  HP++LR+YWI N VV  LF+TSAI+
Sbjct: 150 LMVHEKKFKASKHPLSLRIYWIANLVVSCLFATSAIV 186


>ref|XP_003533361.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1506

 Score =  128 bits (321), Expect = 7e-28
 Identities = 68/157 (43%), Positives = 91/157 (57%), Gaps = 11/157 (7%)
 Frame = +3

Query: 132 ILQWLRFIFLSPCPQRAIFSSVDXXXXXXXXXXXXQKLCSRTHSNDRNNI---------- 281
           I+QWLRFI LSPCPQR + S+VD             KL SR  SN  +N           
Sbjct: 30  IVQWLRFILLSPCPQRVLLSAVDSIFLLSLLAFAAVKLYSRFTSNTTSNNTITKPLLQEK 89

Query: 282 -SHLRTSLWYNVTLFLSALLAITYTVLSVLAFTKAAQSSWELVEAIFRXXXXXXXXXXXX 458
            S  + + W+ + L ++ LLAI YTVLS+LAFT+ + SSW+L+EA+FR            
Sbjct: 90  DSDYKVTFWFKLPLLVTTLLAIAYTVLSILAFTQTSLSSWKLIEALFRLFQAASNIVVAI 149

Query: 459 XXXXEKRFKAVTHPVTLRVYWIVNFVVVALFSTSAII 569
               EK+FKA  HP++LR+YWI N +V  LF+TSAI+
Sbjct: 150 LMAHEKKFKASKHPLSLRIYWIANLMVSCLFATSAIV 186


>ref|XP_003628563.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355522585|gb|AET03039.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1498

 Score =  122 bits (305), Expect = 5e-26
 Identities = 64/153 (41%), Positives = 89/153 (58%), Gaps = 8/153 (5%)
 Frame = +3

Query: 132 ILQWLRFIFLSPCPQRAIFSSVDXXXXXXXXXXXXQKLCSRTHSND-------RNNISHL 290
           ILQWL F+FLSPCPQR + S++D             KL SR ++         +   S  
Sbjct: 28  ILQWLTFLFLSPCPQRLLLSALDSLFLLSLLASAVHKLYSRANTTSSITKPLLKEKDSDY 87

Query: 291 RTSLWYNVTLFLSALLAITYTVLSVLAFTKAAQ-SSWELVEAIFRXXXXXXXXXXXXXXX 467
           R +LW+ +TL ++ LLAITYTVL +LAFT+    SSW+ +EA FR               
Sbjct: 88  RVTLWFKLTLLVTTLLAITYTVLGILAFTQTNNLSSWKQIEAPFRLFQAVVNIVIVILML 147

Query: 468 XEKRFKAVTHPVTLRVYWIVNFVVVALFSTSAI 566
            EK+FK+  HP++LR+YWI NFV+ +LF+ SA+
Sbjct: 148 HEKKFKSSKHPLSLRIYWIANFVIASLFAISAV 180


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score =  122 bits (305), Expect = 5e-26
 Identities = 62/160 (38%), Positives = 94/160 (58%), Gaps = 14/160 (8%)
 Frame = +3

Query: 132 ILQWLRFIFLSPCPQRAIFSSVDXXXXXXXXXXXXQKLCSRTHSN-------------DR 272
           I QWLRFIFLSPCPQRA+ SSVD            QKL SR  S+             + 
Sbjct: 28  IFQWLRFIFLSPCPQRALLSSVDLLFLLFLLGFAAQKLHSRFTSSGYSGSDINYPLVGNG 87

Query: 273 NNISHLRTSLWYNVTLFLSALLAITYTVLSVLAFTKAAQ-SSWELVEAIFRXXXXXXXXX 449
           N+ +H+ TS+W+ ++L +   LA+ Y V+S+LAF+++ Q   W++++ +F          
Sbjct: 88  NSRAHITTSIWFKLSLIVPVFLALCYIVVSILAFSQSTQLPRWKVLDGVFWLVQAITQLV 147

Query: 450 XXXXXXXEKRFKAVTHPVTLRVYWIVNFVVVALFSTSAII 569
                  EKRF AVTHP++LR+YW+ NF+++++F +S II
Sbjct: 148 VAILIIHEKRFHAVTHPLSLRIYWVANFIIISMFMSSGII 187


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