BLASTX nr result

ID: Coptis21_contig00032249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032249
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605185.1| hypothetical protein MTR_4g026350 [Medicago ...    56   3e-06

>ref|XP_003605185.1| hypothetical protein MTR_4g026350 [Medicago truncatula]
           gi|355506240|gb|AES87382.1| hypothetical protein
           MTR_4g026350 [Medicago truncatula]
          Length = 139

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
 Frame = +1

Query: 76  KVKRVRASKQMLINDNGKLIKNDTEELKGSTKSGRVNHKRRS---RHPGFNLDYAPPLTH 246
           K K  R++ Q ++ D  K+      +   S  S RV H ++    +HPGFNLDY+PP TH
Sbjct: 75  KSKHQRSTNQKVLKDMRKVSAELQTKSHVSVSSLRVPHNKKKHSEKHPGFNLDYSPPKTH 134

Query: 247 PPSHN 261
           PPSHN
Sbjct: 135 PPSHN 139


Top