BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032247
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
ref|NP_001190611.1| DNA polymerase delta subunit 1 [Arabidopsis ...   152   4e-35
ref|NP_201201.2| DNA polymerase delta subunit 1 [Arabidopsis tha...   152   4e-35
dbj|BAA96899.1| DNA polymerase III catalytic subunit [Arabidopsi...   152   4e-35
ref|XP_002864879.1| DNA-directed DNA polymerase delta catalytic ...   150   1e-34

>ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|222856491|gb|EEE94038.1|
           predicted protein [Populus trichocarpa]
          Length = 1081

 Score =  155 bits (391), Expect = 4e-36
 Identities = 72/87 (82%), Positives = 82/87 (94%)
 Frame = +2

Query: 2   RIEMVQKKSIMYYQQQQSHLSLKIVVALPTMVAGCRGILERGVQIDGLGTKSFVTYESNV 181
           RIE+V K+SIMYYQQQQSH  LKIVVALPTMV+GCRGIL++G+QIDGLG +SF+TYESNV
Sbjct: 170 RIELVHKRSIMYYQQQQSHPFLKIVVALPTMVSGCRGILDKGIQIDGLGMRSFMTYESNV 229

Query: 182 LFALRFMIDCDIVGGNWIEVPVGKYKK 262
           LFALRFMIDC++VGGNWIEVP GKYKK
Sbjct: 230 LFALRFMIDCNVVGGNWIEVPAGKYKK 256


>ref|NP_001190611.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
           gi|332010439|gb|AED97822.1| DNA polymerase delta subunit
           1 [Arabidopsis thaliana]
          Length = 1112

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/87 (82%), Positives = 78/87 (89%)
 Frame = +2

Query: 2   RIEMVQKKSIMYYQQQQSHLSLKIVVALPTMVAGCRGILERGVQIDGLGTKSFVTYESNV 181
           RIEMVQK+SIMYYQQQ+S   LKI VALPTMVA CRGIL+RG+QIDGLG KSF TYESN+
Sbjct: 186 RIEMVQKRSIMYYQQQKSQTFLKITVALPTMVASCRGILDRGLQIDGLGMKSFQTYESNI 245

Query: 182 LFALRFMIDCDIVGGNWIEVPVGKYKK 262
           LF LRFM+DCDIVGGNWIEVP GKYKK
Sbjct: 246 LFVLRFMVDCDIVGGNWIEVPTGKYKK 272


>ref|NP_201201.2| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
           gi|322510022|sp|Q9LVN7.2|DPOD1_ARATH RecName: Full=DNA
           polymerase delta catalytic subunit; AltName:
           Full=Protein EMBRYO DEFECTIVE 2780
           gi|76262800|gb|ABA41487.1| DNA-directed DNA polymerase
           delta catalytic subunit [Arabidopsis thaliana]
           gi|332010438|gb|AED97821.1| DNA polymerase delta subunit
           1 [Arabidopsis thaliana]
          Length = 1095

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/87 (82%), Positives = 78/87 (89%)
 Frame = +2

Query: 2   RIEMVQKKSIMYYQQQQSHLSLKIVVALPTMVAGCRGILERGVQIDGLGTKSFVTYESNV 181
           RIEMVQK+SIMYYQQQ+S   LKI VALPTMVA CRGIL+RG+QIDGLG KSF TYESN+
Sbjct: 186 RIEMVQKRSIMYYQQQKSQTFLKITVALPTMVASCRGILDRGLQIDGLGMKSFQTYESNI 245

Query: 182 LFALRFMIDCDIVGGNWIEVPVGKYKK 262
           LF LRFM+DCDIVGGNWIEVP GKYKK
Sbjct: 246 LFVLRFMVDCDIVGGNWIEVPTGKYKK 272


>dbj|BAA96899.1| DNA polymerase III catalytic subunit [Arabidopsis thaliana]
          Length = 1081

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/87 (82%), Positives = 78/87 (89%)
 Frame = +2

Query: 2   RIEMVQKKSIMYYQQQQSHLSLKIVVALPTMVAGCRGILERGVQIDGLGTKSFVTYESNV 181
           RIEMVQK+SIMYYQQQ+S   LKI VALPTMVA CRGIL+RG+QIDGLG KSF TYESN+
Sbjct: 184 RIEMVQKRSIMYYQQQKSQTFLKITVALPTMVASCRGILDRGLQIDGLGMKSFQTYESNI 243

Query: 182 LFALRFMIDCDIVGGNWIEVPVGKYKK 262
           LF LRFM+DCDIVGGNWIEVP GKYKK
Sbjct: 244 LFVLRFMVDCDIVGGNWIEVPTGKYKK 270


>ref|XP_002864879.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
           lyrata subsp. lyrata] gi|297310714|gb|EFH41138.1|
           DNA-directed DNA polymerase delta catalytic subunit
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1092

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/87 (80%), Positives = 77/87 (88%)
 Frame = +2

Query: 2   RIEMVQKKSIMYYQQQQSHLSLKIVVALPTMVAGCRGILERGVQIDGLGTKSFVTYESNV 181
           RIEMVQK+SIMYYQQQ+S   LKI VALPTMVA CRGIL+RG+QIDG G KSF TYESN+
Sbjct: 183 RIEMVQKRSIMYYQQQESQTFLKITVALPTMVASCRGILDRGLQIDGFGMKSFQTYESNI 242

Query: 182 LFALRFMIDCDIVGGNWIEVPVGKYKK 262
           +F LRFM+DCDIVGGNWIEVP GKYKK
Sbjct: 243 IFVLRFMVDCDIVGGNWIEVPTGKYKK 269