BLASTX nr result

ID: Coptis21_contig00032240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032240
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272469.1| PREDICTED: CUGBP Elav-like family member 5 [...   137   9e-44
emb|CBI25267.3| unnamed protein product [Vitis vinifera]              137   9e-44
emb|CAN63219.1| hypothetical protein VITISV_033169 [Vitis vinifera]   136   2e-43
gb|ABR16922.1| unknown [Picea sitchensis]                             133   1e-40
dbj|BAJ94672.1| predicted protein [Hordeum vulgare subsp. vulgare]    140   3e-40

>ref|XP_002272469.1| PREDICTED: CUGBP Elav-like family member 5 [Vitis vinifera]
          Length = 257

 Score =  137 bits (346), Expect(2) = 9e-44
 Identities = 61/82 (74%), Positives = 74/82 (90%)
 Frame = -1

Query: 373 QKKAVPRKAAGQTGEDSTLGEWPENDYRLFCGNLGNEATDKILTYAFSRFPNFNMAKVVR 194
           +K+A+PRK AGQT ED TL +WPENDYRLFCG+LGNE  D +L+ AFSRFP+FNMA+VVR
Sbjct: 123 KKRAIPRKVAGQTWEDPTLADWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVR 182

Query: 193 DKRTGKTKGYGFVSFSSPADLA 128
           DKRTGKT+G+GFVSFS+P+DLA
Sbjct: 183 DKRTGKTRGFGFVSFSNPSDLA 204



 Score = 64.3 bits (155), Expect(2) = 9e-44
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = -2

Query: 480 KAHQLFQRDAQAITPDALKNVKAALANSEIGHKANTKKR 364
           +AHQLFQRDAQ ITP+AL++VKAALA+SEI HKA TKKR
Sbjct: 87  QAHQLFQRDAQTITPEALESVKAALASSEIEHKAETKKR 125


>emb|CBI25267.3| unnamed protein product [Vitis vinifera]
          Length = 221

 Score =  137 bits (346), Expect(2) = 9e-44
 Identities = 61/82 (74%), Positives = 74/82 (90%)
 Frame = -1

Query: 373 QKKAVPRKAAGQTGEDSTLGEWPENDYRLFCGNLGNEATDKILTYAFSRFPNFNMAKVVR 194
           +K+A+PRK AGQT ED TL +WPENDYRLFCG+LGNE  D +L+ AFSRFP+FNMA+VVR
Sbjct: 87  KKRAIPRKVAGQTWEDPTLADWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVR 146

Query: 193 DKRTGKTKGYGFVSFSSPADLA 128
           DKRTGKT+G+GFVSFS+P+DLA
Sbjct: 147 DKRTGKTRGFGFVSFSNPSDLA 168



 Score = 64.3 bits (155), Expect(2) = 9e-44
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = -2

Query: 480 KAHQLFQRDAQAITPDALKNVKAALANSEIGHKANTKKR 364
           +AHQLFQRDAQ ITP+AL++VKAALA+SEI HKA TKKR
Sbjct: 51  QAHQLFQRDAQTITPEALESVKAALASSEIEHKAETKKR 89


>emb|CAN63219.1| hypothetical protein VITISV_033169 [Vitis vinifera]
          Length = 257

 Score =  136 bits (343), Expect(2) = 2e-43
 Identities = 60/82 (73%), Positives = 74/82 (90%)
 Frame = -1

Query: 373 QKKAVPRKAAGQTGEDSTLGEWPENDYRLFCGNLGNEATDKILTYAFSRFPNFNMAKVVR 194
           +K+A+PRK AGQT ED TL +WPENDYRLFCG+LGNE  D +L+ +FSRFP+FNMA+VVR
Sbjct: 123 KKRAIPRKVAGQTWEDPTLADWPENDYRLFCGDLGNEVNDDVLSKSFSRFPSFNMARVVR 182

Query: 193 DKRTGKTKGYGFVSFSSPADLA 128
           DKRTGKT+G+GFVSFS+P+DLA
Sbjct: 183 DKRTGKTRGFGFVSFSNPSDLA 204



 Score = 64.3 bits (155), Expect(2) = 2e-43
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = -2

Query: 480 KAHQLFQRDAQAITPDALKNVKAALANSEIGHKANTKKR 364
           +AHQLFQRDAQ ITP+AL++VKAALA+SEI HKA TKKR
Sbjct: 87  QAHQLFQRDAQTITPEALESVKAALASSEIEHKAETKKR 125


>gb|ABR16922.1| unknown [Picea sitchensis]
          Length = 423

 Score =  133 bits (334), Expect(2) = 1e-40
 Identities = 60/83 (72%), Positives = 74/83 (89%)
 Frame = -1

Query: 373 QKKAVPRKAAGQTGEDSTLGEWPENDYRLFCGNLGNEATDKILTYAFSRFPNFNMAKVVR 194
           +KKAVPRK AGQ+ ED TL +WPEND+RLFCG+LGNE  D++LT AFSR+ +F MA+VVR
Sbjct: 289 KKKAVPRKVAGQSWEDPTLADWPENDFRLFCGDLGNEVNDEVLTKAFSRYASFIMARVVR 348

Query: 193 DKRTGKTKGYGFVSFSSPADLAI 125
           DKRTGKT+GYGFVSFS+P+DLA+
Sbjct: 349 DKRTGKTRGYGFVSFSNPSDLAL 371



 Score = 58.5 bits (140), Expect(2) = 1e-40
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = -2

Query: 480 KAHQLFQRDAQAITPDALKNVKAALANSEIGHKANTKKR 364
           +A QLFQ+DAQ ITP+AL+NVKAALA+SE  HKA TKK+
Sbjct: 253 QAQQLFQKDAQTITPEALENVKAALASSESEHKAETKKK 291


>dbj|BAJ94672.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 233

 Score =  140 bits (352), Expect(2) = 3e-40
 Identities = 64/82 (78%), Positives = 73/82 (89%)
 Frame = -1

Query: 373 QKKAVPRKAAGQTGEDSTLGEWPENDYRLFCGNLGNEATDKILTYAFSRFPNFNMAKVVR 194
           +KK +PR+AAGQ+ ED TL EWPENDYRLFCG+LGNE  D +L+ AFSRFP+FNMAKVVR
Sbjct: 99  KKKTIPRRAAGQSWEDPTLTEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVR 158

Query: 193 DKRTGKTKGYGFVSFSSPADLA 128
           DKRTGKTKGYGFVSFS+P DLA
Sbjct: 159 DKRTGKTKGYGFVSFSNPTDLA 180



 Score = 50.1 bits (118), Expect(2) = 3e-40
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = -2

Query: 507 ATSKISFTSKAHQLFQRDAQAITPDALKNVKAALANSEI 391
           AT +     +AHQLFQRDAQ ITP+AL++VKAALA S++
Sbjct: 43  ATYQYQQLQQAHQLFQRDAQTITPEALESVKAALATSDV 81