BLASTX nr result

ID: Coptis21_contig00032234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032234
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525301.1| amino acid binding protein, putative [Ricinu...   148   7e-34
ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854...   140   3e-31
emb|CBI35746.3| unnamed protein product [Vitis vinifera]              140   3e-31
ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264...   140   3e-31
ref|XP_002320665.1| predicted protein [Populus trichocarpa] gi|2...   139   5e-31

>ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
           gi|223535459|gb|EEF37129.1| amino acid binding protein,
           putative [Ricinus communis]
          Length = 477

 Score =  148 bits (374), Expect = 7e-34
 Identities = 77/140 (55%), Positives = 98/140 (70%), Gaps = 4/140 (2%)
 Frame = -3

Query: 636 KCLVAAIERRVSHGLRLDVCTQNKVGLLSDISRVFRESGMSVSRADLSTRGDQAIGSFYV 457
           KCL+AA ERR SHGLRLD+ T N+VGLLSD++RVFRE+G+S+SRA++  +GD+A+GSFY+
Sbjct: 338 KCLIAATERRASHGLRLDISTHNRVGLLSDVTRVFRENGLSISRAEIGLQGDRAVGSFYI 397

Query: 456 TDSSGNDIDPKTVDLVRNEIGEKVLKVNKSSVW----DSERYAXXXXXXXXXXXXXXXSL 289
           TD+SG++ +  T++LVR EIG  VL VNKS  W     S                   SL
Sbjct: 398 TDASGDEANTHTLELVRKEIGGSVLVVNKSPGWTPRTPSTAGISRTSSGSVGEEKPKFSL 457

Query: 288 GSILWSQLERFSSNFGPIRS 229
           GS+LWSQLER S NFG IRS
Sbjct: 458 GSLLWSQLERLSGNFGSIRS 477


>ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854519, partial [Vitis
           vinifera]
          Length = 338

 Score =  140 bits (352), Expect = 3e-31
 Identities = 75/138 (54%), Positives = 98/138 (71%), Gaps = 2/138 (1%)
 Frame = -3

Query: 642 VMKCLVAAIERRVSHGLRLDVCTQNKVGLLSDISRVFRESGMSVSRADLSTRGDQAIGSF 463
           V +CL+AAIERRV+HGLRLD+  +N++GLLSDI+RVFRE+G+S+  A++   G++A GSF
Sbjct: 200 VAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRENGLSIRMAEIGIHGERASGSF 259

Query: 462 YVTDSSGNDIDPKTVDLVRNEIGEKVLKVNKSSVWDS--ERYAXXXXXXXXXXXXXXXSL 289
           YVTD SG D+ P TV+L+R EIG  ++ VNKSSV  S     +               SL
Sbjct: 260 YVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSLPASPSRDRSTASSVENRPRFSL 319

Query: 288 GSILWSQLERFSSNFGPI 235
           G+ LWSQ+ERFSSNFGPI
Sbjct: 320 GT-LWSQIERFSSNFGPI 336


>emb|CBI35746.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  140 bits (352), Expect = 3e-31
 Identities = 75/138 (54%), Positives = 98/138 (71%), Gaps = 2/138 (1%)
 Frame = -3

Query: 642 VMKCLVAAIERRVSHGLRLDVCTQNKVGLLSDISRVFRESGMSVSRADLSTRGDQAIGSF 463
           V +CL+AAIERRV+HGLRLD+  +N++GLLSDI+RVFRE+G+S+  A++   G++A GSF
Sbjct: 186 VAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRENGLSIRMAEIGIHGERASGSF 245

Query: 462 YVTDSSGNDIDPKTVDLVRNEIGEKVLKVNKSSVWDS--ERYAXXXXXXXXXXXXXXXSL 289
           YVTD SG D+ P TV+L+R EIG  ++ VNKSSV  S     +               SL
Sbjct: 246 YVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSLPASPSRDRSTASSVENRPRFSL 305

Query: 288 GSILWSQLERFSSNFGPI 235
           G+ LWSQ+ERFSSNFGPI
Sbjct: 306 GT-LWSQIERFSSNFGPI 322


>ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264704 [Vitis vinifera]
           gi|296085715|emb|CBI29515.3| unnamed protein product
           [Vitis vinifera]
          Length = 468

 Score =  140 bits (352), Expect = 3e-31
 Identities = 75/138 (54%), Positives = 98/138 (71%), Gaps = 2/138 (1%)
 Frame = -3

Query: 642 VMKCLVAAIERRVSHGLRLDVCTQNKVGLLSDISRVFRESGMSVSRADLSTRGDQAIGSF 463
           V +CL+AAIERRV+HGLRLD+  +N++GLLSDI+RVFRE+G+S+  A++   G++A GSF
Sbjct: 330 VAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRENGLSIRMAEIGIHGERASGSF 389

Query: 462 YVTDSSGNDIDPKTVDLVRNEIGEKVLKVNKSSVWDS--ERYAXXXXXXXXXXXXXXXSL 289
           YVTD SG D+ P TV+L+R EIG  ++ VNKSSV  S     +               SL
Sbjct: 390 YVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSLPASPSRDRSTASSVENRPRFSL 449

Query: 288 GSILWSQLERFSSNFGPI 235
           G+ LWSQ+ERFSSNFGPI
Sbjct: 450 GT-LWSQIERFSSNFGPI 466


>ref|XP_002320665.1| predicted protein [Populus trichocarpa] gi|222861438|gb|EEE98980.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  139 bits (350), Expect = 5e-31
 Identities = 71/143 (49%), Positives = 96/143 (67%), Gaps = 7/143 (4%)
 Frame = -3

Query: 636 KCLVAAIERRVSHGLRLDVCTQNKVGLLSDISRVFRESGMSVSRADLSTRGDQAIGSFYV 457
           +CL+AAIERRVSHG RLD+CT N++GLLS+++R FRE+G+S+SRA++ T GD+A+GSFYV
Sbjct: 340 QCLIAAIERRVSHGARLDICTHNRMGLLSNVTRAFRENGLSISRAEIGTNGDRAVGSFYV 399

Query: 456 TDSSGNDIDPKTVDLVRNEIGEKVLKVNKSSVWD-------SERYAXXXXXXXXXXXXXX 298
           TD+SG + +P+ +D V+ E+G  V+ VNKS  W        S                  
Sbjct: 400 TDASGYEANPQAIDEVKKEMGGSVVVVNKSPGWTPKTSRTPSVGSVSRNSSGSIDEEKPR 459

Query: 297 XSLGSILWSQLERFSSNFGPIRS 229
            S GS+ WSQL+R SSNF  IRS
Sbjct: 460 LSPGSLFWSQLKRLSSNFSSIRS 482


Top