BLASTX nr result
ID: Coptis21_contig00032233
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00032233 (256 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324677.1| auxin efflux carrier component [Populus tric... 108 6e-22 ref|XP_002266059.1| PREDICTED: auxin efflux carrier component 2 ... 106 2e-21 ref|NP_001237559.1| auxin efflux carrier protein 3 [Glycine max]... 106 2e-21 ref|NP_001238365.1| auxin efflux carrier protein 4 [Glycine max]... 105 3e-21 emb|CAN70111.1| hypothetical protein VITISV_032889 [Vitis vinifera] 103 1e-20 >ref|XP_002324677.1| auxin efflux carrier component [Populus trichocarpa] gi|222866111|gb|EEF03242.1| auxin efflux carrier component [Populus trichocarpa] Length = 633 Score = 108 bits (269), Expect = 6e-22 Identities = 54/70 (77%), Positives = 60/70 (85%), Gaps = 1/70 (1%) Frame = +1 Query: 1 PKHGYTNNNFQGGGADVYSLQSSKGVTPRTSNLEDEMMKLGKKKGGRSMSGELLN-GTLS 177 PKHGYTN+ FQGG DVYSLQSSKG TPRTSN ++EM+KLGKKKG +MSGEL N G+L Sbjct: 274 PKHGYTNS-FQGGIGDVYSLQSSKGATPRTSNYDEEMLKLGKKKGRTNMSGELFNGGSLV 332 Query: 178 SSYPPPNPMF 207 SSYPPPNPMF Sbjct: 333 SSYPPPNPMF 342 >ref|XP_002266059.1| PREDICTED: auxin efflux carrier component 2 isoform 1 [Vitis vinifera] Length = 630 Score = 106 bits (265), Expect = 2e-21 Identities = 50/69 (72%), Positives = 57/69 (82%) Frame = +1 Query: 1 PKHGYTNNNFQGGGADVYSLQSSKGVTPRTSNLEDEMMKLGKKKGGRSMSGELLNGTLSS 180 P+HG GGGADV+SLQSSKG TPRTSN E+EM+K+GKK+GGRSMSGEL +G L S Sbjct: 274 PRHGSIGGVGAGGGADVFSLQSSKGPTPRTSNFEEEMLKVGKKRGGRSMSGELFHGGLLS 333 Query: 181 SYPPPNPMF 207 SYPPPNPMF Sbjct: 334 SYPPPNPMF 342 >ref|NP_001237559.1| auxin efflux carrier protein 3 [Glycine max] gi|222142549|gb|ACM45961.1| auxin efflux carrier protein 3 [Glycine max] Length = 652 Score = 106 bits (264), Expect = 2e-21 Identities = 53/71 (74%), Positives = 59/71 (83%), Gaps = 2/71 (2%) Frame = +1 Query: 1 PKHGYTNNNFQGGG-ADVYSLQSSKGVTPRTSNLEDEMMKLGKKKGGRSMSGELLNGTL- 174 PKHGYTN+ GG DVYSLQSSKG TPRTSN E+EM+K+ KK+GGRSMSGEL NG L Sbjct: 270 PKHGYTNSFQSNGGIGDVYSLQSSKGATPRTSNFEEEMLKMHKKRGGRSMSGELFNGGLV 329 Query: 175 SSSYPPPNPMF 207 SS+YPPPNPMF Sbjct: 330 SSNYPPPNPMF 340 >ref|NP_001238365.1| auxin efflux carrier protein 4 [Glycine max] gi|222142551|gb|ACM45962.1| auxin efflux carrier protein 4 [Glycine max] Length = 626 Score = 105 bits (263), Expect = 3e-21 Identities = 55/73 (75%), Positives = 61/73 (83%), Gaps = 4/73 (5%) Frame = +1 Query: 1 PKHGYTNNNFQ---GGGADVYSLQSSKGVTPRTSNLEDEMMKLGKKKGGRSMSGELLNGT 171 PKHGYTN+ FQ GG DVYSLQSSKG TPRTSN E+EM+K+ KK+GGRSMSGEL NG Sbjct: 270 PKHGYTNS-FQSNNGGIGDVYSLQSSKGATPRTSNFEEEMLKMHKKRGGRSMSGELFNGG 328 Query: 172 L-SSSYPPPNPMF 207 L SS+YPPPNPMF Sbjct: 329 LVSSNYPPPNPMF 341 >emb|CAN70111.1| hypothetical protein VITISV_032889 [Vitis vinifera] Length = 573 Score = 103 bits (257), Expect = 1e-20 Identities = 49/69 (71%), Positives = 56/69 (81%) Frame = +1 Query: 1 PKHGYTNNNFQGGGADVYSLQSSKGVTPRTSNLEDEMMKLGKKKGGRSMSGELLNGTLSS 180 P+HG GGGADV+SLQSSKG TPRTSN E+EM+K+GKK+GGRSMSGEL +G L S Sbjct: 274 PRHGSIGGVGAGGGADVFSLQSSKGPTPRTSNFEEEMLKVGKKRGGRSMSGELFHGGLLS 333 Query: 181 SYPPPNPMF 207 SYP PNPMF Sbjct: 334 SYPTPNPMF 342