BLASTX nr result

ID: Coptis21_contig00032233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032233
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324677.1| auxin efflux carrier component [Populus tric...   108   6e-22
ref|XP_002266059.1| PREDICTED: auxin efflux carrier component 2 ...   106   2e-21
ref|NP_001237559.1| auxin efflux carrier protein 3 [Glycine max]...   106   2e-21
ref|NP_001238365.1| auxin efflux carrier protein 4 [Glycine max]...   105   3e-21
emb|CAN70111.1| hypothetical protein VITISV_032889 [Vitis vinifera]   103   1e-20

>ref|XP_002324677.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222866111|gb|EEF03242.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 633

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/70 (77%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   PKHGYTNNNFQGGGADVYSLQSSKGVTPRTSNLEDEMMKLGKKKGGRSMSGELLN-GTLS 177
           PKHGYTN+ FQGG  DVYSLQSSKG TPRTSN ++EM+KLGKKKG  +MSGEL N G+L 
Sbjct: 274 PKHGYTNS-FQGGIGDVYSLQSSKGATPRTSNYDEEMLKLGKKKGRTNMSGELFNGGSLV 332

Query: 178 SSYPPPNPMF 207
           SSYPPPNPMF
Sbjct: 333 SSYPPPNPMF 342


>ref|XP_002266059.1| PREDICTED: auxin efflux carrier component 2 isoform 1 [Vitis
           vinifera]
          Length = 630

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/69 (72%), Positives = 57/69 (82%)
 Frame = +1

Query: 1   PKHGYTNNNFQGGGADVYSLQSSKGVTPRTSNLEDEMMKLGKKKGGRSMSGELLNGTLSS 180
           P+HG       GGGADV+SLQSSKG TPRTSN E+EM+K+GKK+GGRSMSGEL +G L S
Sbjct: 274 PRHGSIGGVGAGGGADVFSLQSSKGPTPRTSNFEEEMLKVGKKRGGRSMSGELFHGGLLS 333

Query: 181 SYPPPNPMF 207
           SYPPPNPMF
Sbjct: 334 SYPPPNPMF 342


>ref|NP_001237559.1| auxin efflux carrier protein 3 [Glycine max]
           gi|222142549|gb|ACM45961.1| auxin efflux carrier protein
           3 [Glycine max]
          Length = 652

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/71 (74%), Positives = 59/71 (83%), Gaps = 2/71 (2%)
 Frame = +1

Query: 1   PKHGYTNNNFQGGG-ADVYSLQSSKGVTPRTSNLEDEMMKLGKKKGGRSMSGELLNGTL- 174
           PKHGYTN+    GG  DVYSLQSSKG TPRTSN E+EM+K+ KK+GGRSMSGEL NG L 
Sbjct: 270 PKHGYTNSFQSNGGIGDVYSLQSSKGATPRTSNFEEEMLKMHKKRGGRSMSGELFNGGLV 329

Query: 175 SSSYPPPNPMF 207
           SS+YPPPNPMF
Sbjct: 330 SSNYPPPNPMF 340


>ref|NP_001238365.1| auxin efflux carrier protein 4 [Glycine max]
           gi|222142551|gb|ACM45962.1| auxin efflux carrier protein
           4 [Glycine max]
          Length = 626

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/73 (75%), Positives = 61/73 (83%), Gaps = 4/73 (5%)
 Frame = +1

Query: 1   PKHGYTNNNFQ---GGGADVYSLQSSKGVTPRTSNLEDEMMKLGKKKGGRSMSGELLNGT 171
           PKHGYTN+ FQ   GG  DVYSLQSSKG TPRTSN E+EM+K+ KK+GGRSMSGEL NG 
Sbjct: 270 PKHGYTNS-FQSNNGGIGDVYSLQSSKGATPRTSNFEEEMLKMHKKRGGRSMSGELFNGG 328

Query: 172 L-SSSYPPPNPMF 207
           L SS+YPPPNPMF
Sbjct: 329 LVSSNYPPPNPMF 341


>emb|CAN70111.1| hypothetical protein VITISV_032889 [Vitis vinifera]
          Length = 573

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/69 (71%), Positives = 56/69 (81%)
 Frame = +1

Query: 1   PKHGYTNNNFQGGGADVYSLQSSKGVTPRTSNLEDEMMKLGKKKGGRSMSGELLNGTLSS 180
           P+HG       GGGADV+SLQSSKG TPRTSN E+EM+K+GKK+GGRSMSGEL +G L S
Sbjct: 274 PRHGSIGGVGAGGGADVFSLQSSKGPTPRTSNFEEEMLKVGKKRGGRSMSGELFHGGLLS 333

Query: 181 SYPPPNPMF 207
           SYP PNPMF
Sbjct: 334 SYPTPNPMF 342


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