BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032220
         (188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24272.3| unnamed protein product [Vitis vinifera]              104   9e-21
ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...   104   9e-21
gb|AEU08462.1| pentatricopeptide repeat protein [Takakia lepidoz...   102   4e-20
gb|ACE80762.1| pentatricopeptide repeat protein [Pellia epiphylla]    101   7e-20
gb|AEU08445.1| pentatricopeptide repeat protein [Takakia lepidoz...   100   1e-19

>emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  104 bits (259), Expect = 9e-21
 Identities = 48/62 (77%), Positives = 56/62 (90%)
 Frame = -3

Query: 186 DTKYVLQNLEENEKEDSLCGHKEKLAIAFGLISTPNGTPLRIIKNLRVCGDCHEATKFIS 7
           DT +VLQ+++E+EKE SLCGH EK+A+AFGLIST  GTPLRIIKNLRVCGDCH ATKFIS
Sbjct: 641 DTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFIS 700

Query: 6   KL 1
           K+
Sbjct: 701 KV 702


>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  104 bits (259), Expect = 9e-21
 Identities = 48/62 (77%), Positives = 56/62 (90%)
 Frame = -3

Query: 186  DTKYVLQNLEENEKEDSLCGHKEKLAIAFGLISTPNGTPLRIIKNLRVCGDCHEATKFIS 7
            DT +VLQ+++E+EKE SLCGH EK+A+AFGLIST  GTPLRIIKNLRVCGDCH ATKFIS
Sbjct: 884  DTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFIS 943

Query: 6    KL 1
            K+
Sbjct: 944  KV 945


>gb|AEU08462.1| pentatricopeptide repeat protein [Takakia lepidozioides]
          Length = 152

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/62 (75%), Positives = 55/62 (88%)
 Frame = -3

Query: 186 DTKYVLQNLEENEKEDSLCGHKEKLAIAFGLISTPNGTPLRIIKNLRVCGDCHEATKFIS 7
           DT++VL ++EE +KE SLC H EKLA+AFGLISTP GTP+RIIKNLRVCGDCH ATKFIS
Sbjct: 71  DTRFVLHDVEEEQKEFSLCYHSEKLAMAFGLISTPAGTPMRIIKNLRVCGDCHTATKFIS 130

Query: 6   KL 1
           K+
Sbjct: 131 KI 132


>gb|ACE80762.1| pentatricopeptide repeat protein [Pellia epiphylla]
          Length = 152

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/62 (72%), Positives = 55/62 (88%)
 Frame = -3

Query: 186 DTKYVLQNLEENEKEDSLCGHKEKLAIAFGLISTPNGTPLRIIKNLRVCGDCHEATKFIS 7
           DT +VL +++E +KE  LCGH EKLAIAFGL+STP+GTPLRI+KNLRVCGDCH ATKFI+
Sbjct: 71  DTSFVLHDVDEEKKEFHLCGHSEKLAIAFGLMSTPSGTPLRILKNLRVCGDCHTATKFIA 130

Query: 6   KL 1
           K+
Sbjct: 131 KI 132


>gb|AEU08445.1| pentatricopeptide repeat protein [Takakia lepidozioides]
          Length = 152

 Score =  100 bits (250), Expect = 1e-19
 Identities = 46/62 (74%), Positives = 55/62 (88%)
 Frame = -3

Query: 186 DTKYVLQNLEENEKEDSLCGHKEKLAIAFGLISTPNGTPLRIIKNLRVCGDCHEATKFIS 7
           DT++VL ++E+ +KE SLC H EKLAIAFGLISTP+G P+RIIKNLRVCGDCH ATKFIS
Sbjct: 71  DTRFVLHDVEDEQKELSLCHHSEKLAIAFGLISTPSGMPIRIIKNLRVCGDCHAATKFIS 130

Query: 6   KL 1
           K+
Sbjct: 131 KI 132