BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032207
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532248.1| pentatricopeptide repeat-containing protein,...   132   3e-29
ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi...   131   6e-29
emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]   131   6e-29
ref|XP_003602939.1| Pentatricopeptide repeat-containing protein ...   126   2e-27
ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26

>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/108 (59%), Positives = 79/108 (73%)
 Frame = -3

Query: 325 PWISPLQYQKXXXXXXXXXXXXXXPLDQHPHHKKSKFITHDSAITLIKREKEPQRALDIF 146
           PWISPLQ+ K               L +    +K KFI+H+SAI LIKREK+PQ AL+IF
Sbjct: 22  PWISPLQFSKAAPLVPDSPTETSSTLVETG--RKCKFISHESAINLIKREKDPQHALEIF 79

Query: 145 NMVSNQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFETCKFHE 2
           NMV  Q+GFNHNH+TYS ++HKLAQ+KKF AVDA+L QM++ETCKFHE
Sbjct: 80  NMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHE 127


>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/111 (58%), Positives = 80/111 (72%)
 Frame = -3

Query: 334 SPLPWISPLQYQKXXXXXXXXXXXXXXPLDQHPHHKKSKFITHDSAITLIKREKEPQRAL 155
           S LPWISPLQY                     P  KK KFI+H+SAI LIKRE +PQRAL
Sbjct: 19  SSLPWISPLQYLNATSPKPDPPATEATTTMVEPR-KKPKFISHESAINLIKRETDPQRAL 77

Query: 154 DIFNMVSNQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFETCKFHE 2
           +IFN V+ QRGF+HN++TY+ ILHKLA+SKKF+A+DA+L QM++ETCKFHE
Sbjct: 78  EIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHE 128


>emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
          Length = 714

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/111 (58%), Positives = 80/111 (72%)
 Frame = -3

Query: 334 SPLPWISPLQYQKXXXXXXXXXXXXXXPLDQHPHHKKSKFITHDSAITLIKREKEPQRAL 155
           S LPWISPLQY                     P  KK KFI+H+SAI LIKRE +PQRAL
Sbjct: 89  SSLPWISPLQYLNATSPKPDPPATEATTTMVEPR-KKPKFISHESAINLIKRETDPQRAL 147

Query: 154 DIFNMVSNQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFETCKFHE 2
           +IFN V+ QRGF+HN++TY+ ILHKLA+SKKF+A+DA+L QM++ETCKFHE
Sbjct: 148 EIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHE 198


>ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491987|gb|AES73190.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  126 bits (317), Expect = 2e-27
 Identities = 67/117 (57%), Positives = 78/117 (66%), Gaps = 6/117 (5%)
 Frame = -3

Query: 334 SPLPWISPLQYQKXXXXXXXXXXXXXXPLDQHPH------HKKSKFITHDSAITLIKREK 173
           S LPWISPL + K               LD  P        KKSK+ITHD AI LIKREK
Sbjct: 95  SSLPWISPLNFTKPLEPK----------LDPPPEIVVAETRKKSKYITHDVAINLIKREK 144

Query: 172 EPQRALDIFNMVSNQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFETCKFHE 2
           +PQ AL IFNMVS Q+GFNHN++TY+ IL KLAQ KKF+AVD +L QM++E CKFHE
Sbjct: 145 DPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYEACKFHE 201


>ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|222842808|gb|EEE80355.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/116 (52%), Positives = 79/116 (68%), Gaps = 5/116 (4%)
 Frame = -3

Query: 334 SPLPWISPLQYQKXXXXXXXXXXXXXXPLDQHPH-----HKKSKFITHDSAITLIKREKE 170
           S LPWISPL +                 LD  P       +K KFI+H++A+ LIK E++
Sbjct: 16  SSLPWISPLHF-------------LTPKLDPPPKTLLEPRRKPKFISHETAVNLIKHERD 62

Query: 169 PQRALDIFNMVSNQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFETCKFHE 2
           PQ AL+IFN+V  Q+GFNHNH+TYS I+ KLA++KKF+AVDA+LRQM +ETCKFHE
Sbjct: 63  PQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDALLRQMMYETCKFHE 118