BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032189
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   211   2e-52
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   207   3e-51
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   206   6e-51
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   203   3e-50
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   203   4e-50

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  211 bits (536), Expect = 2e-52
 Identities = 107/259 (41%), Positives = 158/259 (61%)
 Frame = -1

Query: 782  LVNLCISSPHFSVLVNGSPFGYFKSNQGLRQGDPLSPILFILIMEVLSRILENKIEDKSI 603
            LV  C++S  FSVLVNG P   F  ++GLRQGDPLSP LF++  E LS +L +  E K I
Sbjct: 614  LVMNCVTSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFLFVVCAEGLSTLLRDAEEKKVI 673

Query: 602  HGISISRYSKPISHLLFVDDAFIFCRANMSEAEELLDALNLFCVITGQEINYEKSGIHFS 423
            HG+ I     PISHL F DD+ +F RA   E E ++D L+ +   +GQ++N EKS + +S
Sbjct: 674  HGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAASGQKLNMEKSEMSYS 733

Query: 422  KNVHPELASCIMKALNMRSIVIGEKYLGSPLFLGQPKSHIFNEIITKVNTRIAGWKSKLL 243
            +N+ P+  + +   L  +++   EKYLG P F+G  K  +F  I  +V  ++ GWK K L
Sbjct: 734  RNLEPDKINTLQMKLAFKTVEGHEKYLGLPTFIGSSKKRVFQAIQDRVWKKLKGWKGKYL 793

Query: 242  SQAARTVLIKSISSAIPSFHMSTFMLPSHITSTINGLQRDFWWGTNKGKTHPLYLKSWRF 63
            SQA R VLIK+++ AIP++ M  F++P  I   I  + R+F+WG  + +    ++ +W  
Sbjct: 794  SQAGREVLIKAVAQAIPTYAMQCFVIPKSIIDGIEKMCRNFFWGQKEEERRVAWV-AWEK 852

Query: 62   ICQSKKSGGLGIRDMSINN 6
            +   KK GGLGIR+  + N
Sbjct: 853  LFLPKKEGGLGIRNFDVFN 871


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  207 bits (526), Expect = 3e-51
 Identities = 101/259 (38%), Positives = 157/259 (60%)
 Frame = -1

Query: 782  LVNLCISSPHFSVLVNGSPFGYFKSNQGLRQGDPLSPILFILIMEVLSRILENKIEDKSI 603
            LV  C+++  +S ++NG   G    ++GLRQGDPLSP LFIL+ +  S++++ K+  K I
Sbjct: 612  LVMSCVATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQMVKQKVVSKEI 671

Query: 602  HGISISRYSKPISHLLFVDDAFIFCRANMSEAEELLDALNLFCVITGQEINYEKSGIHFS 423
            HG   SR    ISHLLF DD+ +F RA   E   ++D LN +   +GQ+INYEKS + FS
Sbjct: 672  HGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFS 731

Query: 422  KNVHPELASCIMKALNMRSIVIGEKYLGSPLFLGQPKSHIFNEIITKVNTRIAGWKSKLL 243
            + V  E    ++  L+MR +   +KYLG P   G+ K  +F E++ ++  ++ GWK KLL
Sbjct: 732  RGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLL 791

Query: 242  SQAARTVLIKSISSAIPSFHMSTFMLPSHITSTINGLQRDFWWGTNKGKTHPLYLKSWRF 63
            S+A + VLIK++  A+P++ M  + LP  +   I+     FWWG  KG    ++  SW  
Sbjct: 792  SRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWG-GKGDERKMHWLSWEK 850

Query: 62   ICQSKKSGGLGIRDMSINN 6
            +C+ K  GG+G +D+++ N
Sbjct: 851  MCKPKCMGGMGFKDLAVFN 869


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  206 bits (523), Expect = 6e-51
 Identities = 101/254 (39%), Positives = 154/254 (60%)
 Frame = -1

Query: 767  ISSPHFSVLVNGSPFGYFKSNQGLRQGDPLSPILFILIMEVLSRILENKIEDKSIHGISI 588
            +SS  +S ++NGS  G     +GLRQGDPLSP LFI++ +  S++++ K++DK +HG   
Sbjct: 614  VSSVTYSFIINGSVCGSVVPARGLRQGDPLSPYLFIMVADAFSKMIQRKVQDKQLHGAKA 673

Query: 587  SRYSKPISHLLFVDDAFIFCRANMSEAEELLDALNLFCVITGQEINYEKSGIHFSKNVHP 408
            SR    ISHL F DD+ +F RAN  E   ++D LN + + +GQ+INYEKS + +S+ V  
Sbjct: 674  SRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYELASGQKINYEKSEVSYSRGVSV 733

Query: 407  ELASCIMKALNMRSIVIGEKYLGSPLFLGQPKSHIFNEIITKVNTRIAGWKSKLLSQAAR 228
                 +   LNMR +   EKYLG P   G+ K  IF+ +I ++  ++ GWK KLLS+A +
Sbjct: 734  SQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEKLLSRAGK 793

Query: 227  TVLIKSISSAIPSFHMSTFMLPSHITSTINGLQRDFWWGTNKGKTHPLYLKSWRFICQSK 48
             VL+KS+  AIP++ M  +  P  I   I      FWWG++  +   ++ K+W  +C  K
Sbjct: 794  EVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWGSSDTQ-RKIHWKNWDSMCNLK 852

Query: 47   KSGGLGIRDMSINN 6
              GG+G +D++I N
Sbjct: 853  CFGGMGFKDLTIFN 866


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  203 bits (517), Expect = 3e-50
 Identities = 100/259 (38%), Positives = 157/259 (60%)
 Frame = -1

Query: 782  LVNLCISSPHFSVLVNGSPFGYFKSNQGLRQGDPLSPILFILIMEVLSRILENKIEDKSI 603
            L+  C+ S  +SVL+ G+PFG  K ++GLRQGDP+SP LF+++ E LS ++     ++ I
Sbjct: 893  LIMDCVKSVTYSVLLQGAPFGKIKPSRGLRQGDPISPYLFLIVAEGLSALIRKAEREQQI 952

Query: 602  HGISISRYSKPISHLLFVDDAFIFCRANMSEAEELLDALNLFCVITGQEINYEKSGIHFS 423
            HG++I+R +  +SHL + DD+ +FC A +++   L +  + +   +GQ+IN +KS I FS
Sbjct: 953  HGVAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNIFSTYEAASGQKINKDKSAICFS 1012

Query: 422  KNVHPELASCIMKALNMRSIVIGEKYLGSPLFLGQPKSHIFNEIITKVNTRIAGWKSKLL 243
                  +       L+M  +   E+YLG P   G+ K  +F  +  +V  R+ GW+ KLL
Sbjct: 1013 PKSPAAIKEACSAILDMPVVPCHERYLGLPTVSGKDKKKLFQSLPDRVWNRVHGWEGKLL 1072

Query: 242  SQAARTVLIKSISSAIPSFHMSTFMLPSHITSTINGLQRDFWWGTNKGKTHPLYLKSWRF 63
            S+A + VLIK+++ AIP++ MS F LP+  +  IN     FWWG   GK   ++ + W  
Sbjct: 1073 SKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVARFWWGKEGGK--GIHWRRWSD 1130

Query: 62   ICQSKKSGGLGIRDMSINN 6
            +C SKK GGLG RD+S+ N
Sbjct: 1131 LCFSKKDGGLGFRDLSLFN 1149


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  203 bits (516), Expect = 4e-50
 Identities = 101/260 (38%), Positives = 151/260 (58%)
 Frame = -1

Query: 782  LVNLCISSPHFSVLVNGSPFGYFKSNQGLRQGDPLSPILFILIMEVLSRILENKIEDKSI 603
            LV  C+++   SVL+NG P   F  ++GLRQGDPLSP LF+ + +VLSR++    +D  +
Sbjct: 1214 LVMSCVTTSSLSVLINGKPGPSFLPSRGLRQGDPLSPFLFLFVNDVLSRMINKMCQDSLL 1273

Query: 602  HGISISRYSKPISHLLFVDDAFIFCRANMSEAEELLDALNLFCVITGQEINYEKSGIHFS 423
              ++I   + P+SHL F DD+  F RA +   E L D L+ +C+ +GQ IN EKS I FS
Sbjct: 1274 TPVTIGPNNLPVSHLFFADDSLFFLRATLQNCETLSDLLHTYCIASGQLINVEKSSIFFS 1333

Query: 422  KNVHPELASCIMKALNMRSIVIGEKYLGSPLFLGQPKSHIFNEIITKVNTRIAGWKSKLL 243
             N  PE+A  +   + +  +     YLG P F  + K      I   +  ++ GWK   L
Sbjct: 1334 PNTPPEIAHLLSSIMQIPVVSDPGTYLGLPTFWHRSKKKALGFIKDSILRKVKGWKQATL 1393

Query: 242  SQAARTVLIKSISSAIPSFHMSTFMLPSHITSTINGLQRDFWWGTNKGKTHPLYLKSWRF 63
            SQA + VLIK++++AIP++ M  F  PS +   +NG+  DFWWG     T  ++ KSW F
Sbjct: 1394 SQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELNGILADFWWG--NVDTRGIHWKSWDF 1451

Query: 62   ICQSKKSGGLGIRDMSINNH 3
            + + KK GG+G R++   N+
Sbjct: 1452 LARPKKDGGMGFRNLEDFNN 1471