BLASTX nr result

ID: Coptis21_contig00032181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032181
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532849.1| PREDICTED: uncharacterized protein LOC100797...   124   6e-27
ref|XP_003630101.1| Nuclear transcription factor Y subunit B-3 [...   123   1e-26
ref|XP_003524282.1| PREDICTED: nuclear transcription factor Y su...   122   2e-26
ref|XP_002320523.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
gb|ABK23156.1| unknown [Picea sitchensis]                             121   7e-26

>ref|XP_003532849.1| PREDICTED: uncharacterized protein LOC100797721 [Glycine max]
          Length = 236

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/77 (83%), Positives = 69/77 (89%)
 Frame = -2

Query: 231 GSPSDETDTGGNMLDNFSLKDQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEF 52
           GSP     T GN+ D++S K+QDRFLPIANVSRIMK+ALPANAKISKEAKETVQECVSEF
Sbjct: 15  GSP-----TSGNISDSYSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECVSEF 69

Query: 51  ISFITGEASDKCQREKR 1
           ISFITGEASDKCQREKR
Sbjct: 70  ISFITGEASDKCQREKR 86


>ref|XP_003630101.1| Nuclear transcription factor Y subunit B-3 [Medicago truncatula]
           gi|355524123|gb|AET04577.1| Nuclear transcription factor
           Y subunit B-3 [Medicago truncatula]
           gi|388523209|gb|AFK49657.1| nuclear transcription factor
           Y subunit B7 [Medicago truncatula]
          Length = 201

 Score =  123 bits (309), Expect = 1e-26
 Identities = 64/77 (83%), Positives = 68/77 (88%)
 Frame = -2

Query: 231 GSPSDETDTGGNMLDNFSLKDQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEF 52
           GSP     T GN+ D+ S K+QDRFLPIANVSRIMK+ALPANAKISKEAKETVQECVSEF
Sbjct: 13  GSP-----TSGNISDSLSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECVSEF 67

Query: 51  ISFITGEASDKCQREKR 1
           ISFITGEASDKCQREKR
Sbjct: 68  ISFITGEASDKCQREKR 84


>ref|XP_003524282.1| PREDICTED: nuclear transcription factor Y subunit B-7-like [Glycine
           max]
          Length = 225

 Score =  122 bits (307), Expect = 2e-26
 Identities = 64/77 (83%), Positives = 68/77 (88%)
 Frame = -2

Query: 231 GSPSDETDTGGNMLDNFSLKDQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEF 52
           GSP     T GN+ D+ S K+QDRFLPIANVSRIMK+ALPANAKISKEAKETVQECVSEF
Sbjct: 14  GSP-----TSGNISDSSSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECVSEF 68

Query: 51  ISFITGEASDKCQREKR 1
           ISFITGEASDKCQREKR
Sbjct: 69  ISFITGEASDKCQREKR 85


>ref|XP_002320523.1| predicted protein [Populus trichocarpa] gi|222861296|gb|EEE98838.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/74 (82%), Positives = 64/74 (86%)
 Frame = -2

Query: 222 SDETDTGGNMLDNFSLKDQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISF 43
           SD    G N +   S K+QDRFLPIANVSRIMKKALPANAKISK+AKETVQECVSEFISF
Sbjct: 4   SDNESGGHNAVSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISF 63

Query: 42  ITGEASDKCQREKR 1
           ITGEASDKCQREKR
Sbjct: 64  ITGEASDKCQREKR 77


>gb|ABK23156.1| unknown [Picea sitchensis]
          Length = 228

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/78 (76%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
 Frame = -2

Query: 228 SPSDETDTGGNML--DNFSLKDQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSE 55
           SP  E ++GG  +   +FS+K+QDRFLPIANV RIMKKALPAN K+SK+AKETVQECVSE
Sbjct: 11  SPRSENESGGGHMGGSDFSVKEQDRFLPIANVGRIMKKALPANGKVSKDAKETVQECVSE 70

Query: 54  FISFITGEASDKCQREKR 1
           FISFITGEASDKCQREKR
Sbjct: 71  FISFITGEASDKCQREKR 88


Top